checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for sed... sed checking for style of include used by make... 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(cached) yes checking how to print strings... printf checking for a sed that does not truncate output... sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by /home/tiantian/mpich2-install/bin/mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for ar... ar checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from /home/tiantian/mpich2-install/bin/mpicc object... ok checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if /home/tiantian/mpich2-install/bin/mpicc supports -fno-rtti -fno-exceptions... no checking for /home/tiantian/mpich2-install/bin/mpicc option to produce PIC... -fPIC -DPIC checking if /home/tiantian/mpich2-install/bin/mpicc PIC flag -fPIC -DPIC works... yes checking if /home/tiantian/mpich2-install/bin/mpicc static flag -static works... no checking if /home/tiantian/mpich2-install/bin/mpicc supports -c -o file.o... yes checking if /home/tiantian/mpich2-install/bin/mpicc supports -c -o file.o... (cached) yes checking whether the /home/tiantian/mpich2-install/bin/mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... 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(cached) yes checking whether the /home/tiantian/mpich2-install/bin/mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /home/tiantian/mpich2-install/bin/mpif77 option to produce PIC... -fPIC checking if /home/tiantian/mpich2-install/bin/mpif77 PIC flag -fPIC works... yes checking if /home/tiantian/mpich2-install/bin/mpif77 static flag -static works... no checking if /home/tiantian/mpich2-install/bin/mpif77 supports -c -o file.o... yes checking if /home/tiantian/mpich2-install/bin/mpif77 supports -c -o file.o... (cached) yes checking whether the /home/tiantian/mpich2-install/bin/mpif77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /home/tiantian/mpich2-install/bin/mpif90 option to produce PIC... -fPIC checking if /home/tiantian/mpich2-install/bin/mpif90 PIC flag -fPIC works... yes checking if /home/tiantian/mpich2-install/bin/mpif90 static flag -static works... no checking if /home/tiantian/mpich2-install/bin/mpif90 supports -c -o file.o... yes checking if /home/tiantian/mpich2-install/bin/mpif90 supports -c -o file.o... (cached) yes checking whether the /home/tiantian/mpich2-install/bin/mpif90 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for known C compilers... GNU checking for known compiler/OS combinations... GNU:x86_64 checking for known c++ compilers... GNU checking for known compiler/OS combinations... GNU:x86_64 checking if platform is IBM BlueGene... no checking for gunzip... gunzip -c checking for gzip... (cached) gunzip -c checking for zcat... (cached) gunzip -c checking if C++ compiler supports template class specialization... yes checking if C++ compiler supports template function specialization... yes checking if /home/tiantian/mpich2-install/bin/mpicxx works... yes checking how to get verbose linking output from /home/tiantian/mpich2-install/bin/mpif90... -v checking for Fortran libraries of /home/tiantian/mpich2-install/bin/mpif90... -L/home/tiantian/mpich2-install/lib -L/usr/lib/gcc/x86_64-redhat-linux/4.5.1 -L/usr/lib/gcc/x86_64-redhat-linux/4.5.1/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/4.5.1/../../.. -lgfortran -lm -lmpichf90 -lmpich -lopa -lmpl -lrt -lpthread checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for vsnprintf... yes checking if std::vector has templatized insert method... yes checking if std::copy must be old SGI format... no checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for sys/types.h... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking size of void *... 8 checking for size_t... yes checking for ptrdiff_t... yes checking size of EntityHandle... 8 checking if iMesh support is to be built... yes checking if iGeom support is to be built... no configure: creating ./config.lt config.lt: creating libtool checking ieeefp.h usability... no checking ieeefp.h presence... no checking for ieeefp.h... no checking for C++ unordered_map... std::tr1 checking mpi.h usability... yes checking mpi.h presence... yes checking for mpi.h... yes checking If mpi.h conflicts with C headers in C++... no checking for mpiexec... no checking for mpirun... no checking for deflate in -lz... yes checking for SZ_Decompress in -lsz... yes checking if HDF5 support is enabled... yes checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for gpfs_stat in -lgpfs... no checking for H5Fopen in -lhdf5... no checking for H5Fopen in -lhdf5... no checking for H5Fopen in -lhdf5... no checking for 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-lnetcdf... yes checking if Pnetcdf support is enabled... yes checking pnetcdf.h usability... no checking pnetcdf.h presence... no checking for pnetcdf.h... no checking for ncmpi_create in -lpnetcdf... no checking if mbconvert is to be built... yes checking if hexmodops is to be built... yes checking if qvdual is to be built... no checking if vtkMOABReader is to be built... no checking if mbsize is to be built... yes checking if mbskin is to be built... yes checking if mbtagprop is to be built... yes checking if mbmem is to be built... yes checking if mcnpmit is to be built... no checking if mbcoupler is to be built... no checking if spheredecomp is to be built... yes checking if mbsurfplot is to be built... yes checking if mbzoltan is to be built... no checking if dagmc is to be built... yes checking if gsets is to be built... yes checking if mbdepth is to be built... yes checking if refiner is to be built... no checking if h5mtools is to be built... yes configure: creating ./config.status config.status: creating Makefile config.status: creating moab.make config.status: creating src/Makefile config.status: creating src/io/Makefile config.status: creating src/io/mhdf/Makefile config.status: creating src/parallel/Makefile config.status: creating src/oldinc/Makefile config.status: creating test/Makefile config.status: creating test/h5file/Makefile config.status: creating test/dual/Makefile config.status: creating test/obb/Makefile config.status: creating test/perf/Makefile config.status: creating test/io/Makefile config.status: creating test/parallel/Makefile config.status: creating test/oldinc/Makefile config.status: creating itaps/Makefile config.status: creating itaps/imesh/Makefile config.status: creating itaps/imesh/iMesh-Defs.inc config.status: creating itaps/igeom/Makefile config.status: creating itaps/igeom/iGeom-Defs.inc config.status: creating tools/Makefile config.status: creating tools/refiner/Makefile config.status: creating tools/mbcoupler/Makefile config.status: creating tools/mbzoltan/Config.moab config.status: creating tools/mbzoltan/Makefile config.status: creating tools/mcnpmit/Makefile config.status: creating tools/qvdual/Makefile config.status: creating tools/vtkMOABReader/Makefile config.status: creating tools/dagmc/Makefile config.status: creating tools/vtkMOABReader/CMakeLists.txt config.status: creating doc/Makefile config.status: creating doc/user.dox config.status: creating doc/config.tex config.status: creating examples/Makefile config.status: creating examples/examples.make config.status: creating examples/simple/makefile config.status: creating examples/itaps/Makefile config.status: creating MeshFiles/Makefile config.status: creating MeshFiles/unittest/Makefile config.status: creating MeshFiles/unittest/io/Makefile config.status: creating config.h config.status: creating src/moab/Version.h config.status: creating src/moab/EntityHandle.hpp config.status: creating src/parallel/moab_mpi_config.h config.status: creating src/FCDefs.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing src/MOAB_FCDefs.h commands C: /home/tiantian/mpich2-install/bin/mpicc -Wall -pipe -pedantic -Wno-long-long -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set C++: /home/tiantian/mpich2-install/bin/mpicxx -Wall -pipe -pedantic -Wno-long-long -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DHAVE_UNORDERED_SET=tr1/unordered_set Fortran: /home/tiantian/mpich2-install/bin/mpif90 -g -O2