<div dir="ltr">Hi All,<div><br></div><div>I'm trying to run noop.tcl with turbine on Raven. I keep getting a memory error:</div><div>apsched: claim exceeds reservation's memory<br></div><div><br></div><div style>I tried a few different values(100, 100M) for</div>
<div style>#PBS -m </div><div style>but I keep getting the error.</div><div style><br></div><div style>Is there a way to let the PBS job take as much memory as it needs?</div><div style><br></div><div style>Thanks,</div>
<div style>
Scott</div><div style><br></div><div style>=====aprun.sh script that I'm running=====</div><div><div># USAGE: qsub aprun.sh</div><div><br></div><div># The user should copy and edit the parameters throughout this script</div>
<div># marked USER:</div><div><br></div><div># USER: Directory available from compute nodes:</div><div>USER_WORK=/ufs/home/users/p01684</div><div><br></div><div># USER: (optional) Change the qstat name</div><div>#PBS -N turbine</div>
<div># USER: Set the job size</div><div>#PBS -l mppwidth=1,mppnppn=3,mppdepth=1</div><div># USER: Set the wall time</div><div>#PBS -l walltime=10:00</div><div># USER: (optional) Redirect output from its default location ($PWD)</div>
<div>#PBS -o /ufs/home/users/p01684/pbs.out</div><div><br></div><div>#PBS -j oe</div><div>#PBS -m n</div><div><br></div><div># USER: Set configuration of Turbine processes</div><div>export TURBINE_ENGINES=1</div><div>export ADLB_SERVERS=1</div>
<div><br></div><div>echo "Turbine: aprun.sh"</div><div>date "+%m/%d/%Y %I:%M%p"</div><div>echo</div><div><br></div><div># Be sure we are in an accessible directory</div><div>cd $PBS_O_WORKDIR</div><div>
<br></div><div>set -x</div><div># USER: Set Turbine installation path</div><div>export TURBINE_HOME=${USER_WORK}/Public/sfw/turbine</div><div># USER: Select program name</div><div># PROGRAM=${USER_WORK}/adlb-data.tcl</div>
<div>PROGRAM=${TURBINE_HOME}/test/noop.tcl</div><div><br></div><div>source ${TURBINE_HOME}/scripts/turbine-config.sh</div><div>if [[ ${?} != 0 ]]</div><div>then</div><div> echo "turbine: configuration error!"</div>
<div> exit 1</div><div>fi</div><div><br></div><div># Send environment variables to PBS job:</div><div>#PBS -v TURBINE_ENGINES ADLB_SERVERS TURBINE_HOME</div><div># USER: Set aprun parameters to agree with PBS -l settings</div>
<div># aprun -n 1 -N 1 -cc none -d 1 ${TCLSH} ${PROGRAM}</div><div>aprun -n 3 -N 3 -cc none -d 1 ${TURBINE_HOME}/bin/turbine ${PROGRAM}</div><div><div><br></div>-- <br><font face="Times" size="3">Scott J. Krieder<br></font><div>
<div><font face="Times" size="3">C: 419-685-0410<br></font><div><font face="Times" size="3">E: <a href="mailto:skrieder@iit.edu" target="_blank" onclick="window.open('https://mail.google.com/mail/?view=cm&tf=1&to=skrieder@iit.edu&cc=&bcc=&su=&body=','_blank');return false;">skrieder@iit.edu</a><br>
</font><div><font face="Times" size="3"><a href="http://datasys.cs.iit.edu/~skrieder/" target="_blank">http://datasys.cs.iit.edu/~skrieder/</a></font></div></div></div></div>
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