<html><head><meta http-equiv="Content-Type" content="text/html; charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class="">Hello all,<div class=""><br class=""></div><div class="">I have a python code and I am using parallel hdf5 through h5py. </div><div class="">I compiled darshan with the following options:<br class=""> ./configure --prefix=/home/mkhoshle/instal<wbr class="">ls/darshan --with-mem- align=8 --with-log-path=/oasis/scratch/comet/mkho<wbr class="">shle/temp_project/darshan-logs --with-jobid-env=PBS_JOBID --enable-HDF5-post-1.10 CC=mpicc </div><div class=""><br class=""></div><div class="">I set the the environment variable LD_PRELOAD as:</div><div class=""><div style="margin: 0px; font-stretch: normal; font-size: 11px; line-height: normal; font-family: Menlo;" class=""><span style="font-variant-ligatures: no-common-ligatures; color: #c1651c" class="">export</span><span style="font-variant-ligatures: no-common-ligatures; color: #2eaebb" class=""> LD_PRELOAD=</span><span style="font-variant-ligatures: no-common-ligatures" class="">/home/mkhoshle/installs/darshan/lib/libdarshan.so:/home/mkhoshle/hdf5/v1.10.1/lib/libhdf5.so</span></div></div><div style="margin: 0px; font-stretch: normal; font-size: 11px; line-height: normal; font-family: Menlo;" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""><br class=""></span></div><div style="margin: 0px; font-stretch: normal; font-size: 11px; line-height: normal; font-family: Menlo;" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">And I am using Darshan 3.1.5.</span></div><div style="margin: 0px; font-stretch: normal; font-size: 11px; line-height: normal; font-family: Menlo;" class="">I can run my code with no error but when I run darshan-summary-per-file.sh I get the following error and I get no output.</div><div style="margin: 0px; font-stretch: normal; font-size: 11px; line-height: normal; font-family: Menlo;" class=""><br class=""></div><div style="margin: 0px; font-stretch: normal; font-size: 11px; line-height: normal; font-family: Menlo;" class=""><div style="margin: 0px; font-stretch: normal; line-height: normal;" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">darshan-summary-per-file.sh /oasis/scratch/comet/mkhoshle/temp_project/darshan-logs/2019/1/15/mkhoshle_python_id10574_1-15-58292-3565400970146387705_1.darshan /oasis/scratch/comet/mkhoshle/temp_project/darshan/58292</span></div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""><br class=""></span></div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">Status: Generating summary for file 1 of 64: __init__.py</span></div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">=======================================================</span></div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">/home/mkhoshle/installs/darshan/bin/darshan-summary-per-file.sh: line 63: 27764 Segmentation fault darshan-convert --file $hash $1 $2/$file.darshan</span></div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">=======================================================</span></div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class=""><span style="font-variant-ligatures: no-common-ligatures" class="">darshan-summary-per-file.sh done. Results can be found in /oasis/scratch/comet/mkhoshle/temp_project/darshan/58292/*.pdf.</span></div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class=""><span style="font-variant-ligatures: no-common-ligatures" class=""><br class=""></span></div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class="">Am I doing anything wrong? </div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class=""><br class=""></div><div style="margin: 0px; font-stretch: normal; line-height: normal;" class="">Thanks,</div></div></body></html>