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<div class="moz-cite-prefix">Hi Richard,<br>
<br>
Thanks for the bug report! We've got an issue open on gitlab to
track this now; should be an easy fix when we are back in the
office next week.<br>
<br>
thanks,<br>
-Phil<br>
<br>
On 12/21/2015 02:28 PM, Hedges, Richard M. wrote:<br>
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Hoping someone will see my error. I thought that I was
pointing to all of the needed libraries, but apparently
not.</p>
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<br>
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<p style="margin: 0px; font-family: Monaco;"><span
style="background-color: rgb(254, 251, 253);">Thanks,</span></p>
<p style="margin: 0px; font-family: Monaco;"><span
style="background-color: rgb(253, 249, 252);">- Richard</span></p>
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background-color: rgb(255, 252, 254);">
<br>
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<br>
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SCRIPT:</p>
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<br>
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background-color: rgb(255, 252, 254);">
cat run.vulcan</p>
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background-color: rgb(255, 252, 254);">
#!/bin/csh</p>
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background-color: rgb(255, 252, 254); min-height: 19px;">
<br>
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background-color: rgb(255, 252, 254);">
#MSUB -l nodes=192</p>
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background-color: rgb(255, 252, 254);">
#MSUB -l partition=vulcan</p>
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background-color: rgb(255, 252, 254);">
#MSUB -l walltime=1:00:00</p>
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background-color: rgb(255, 252, 254);">
#MSUB -q psmall</p>
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background-color: rgb(255, 252, 254);">
#MSUB -V</p>
<p style="margin: 0px; font-family: Monaco;
background-color: rgb(255, 252, 254);">
#MSUB -o
/p/lscratchv/rhedges/USERS/jcaps/ZPGTBL_3D/sim.out</p>
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background-color: rgb(255, 252, 254); min-height: 19px;">
<br>
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background-color: rgb(255, 252, 254);">
cd /p/lscratchv/rhedges/USERS/jcaps/ZPGTBL_3D</p>
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background-color: rgb(255, 252, 254);">
date</p>
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background-color: rgb(255, 252, 254); min-height: 19px;">
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background-color: rgb(255, 252, 254);">
setenv DARSHAN_LOG_PATH `pwd`</p>
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background-color: rgb(255, 252, 254);">
setenv LD_LIBRARY_PATH
/bgsys/drivers/ppcfloor/comm/lib:/p/lscratchv/rhedges/hdf5-1.8.16/Install/hdf5-1.8.16/parallel_gnu/lib:/bgsys/drivers/ppcfloor/comm/lib</p>
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background-color: rgb(255, 252, 254);">
setenv LD_PRELOAD
/bgsys/drivers/ppcfloor/comm/lib/libmpichf90-gcc.so:/g/g0/rhedges/DARSHAN_3/darshan-3.0.0-pre2/Install/lib/libdarshan.so</p>
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background-color: rgb(255, 252, 254); min-height: 19px;">
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background-color: rgb(255, 252, 254);">
srun --export=LD_PRELOAD,DARSHAN_LOG_PATH,LD_LIBRARY_PATH
\</p>
<p style="margin: 0px; font-family: Monaco;
background-color: rgb(255, 252, 254);">
-N 192 -n 768
/p/lscratchv/rhedges/USERS/jcaps/PlasComCM/src/plascomcm
RocFlo-CM.00000000.h5</p>
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background-color: rgb(255, 252, 254);">
echo ‘Done'</p>
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background-color: rgb(255, 252, 254);">
<br>
</p>
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background-color: rgb(255, 252, 254);">
<br>
</p>
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background-color: rgb(255, 252, 254);">
RESULT:</p>
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background-color: rgb(255, 252, 254);">
<br>
</p>
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background-color: rgb(255, 252, 254);">
vulcanlac3{rhedges}631: csh run.vulcan</p>
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background-color: rgb(255, 252, 254);">
/p/lscratchv/rhedges/USERS/jcaps/ZPGTBL_3D</p>
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background-color: rgb(255, 252, 254);">
Mon Dec 21 11:23:23 PST 2015</p>
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background-color: rgb(255, 252, 254);">
srun: symbol lookup error:
/g/g0/rhedges/DARSHAN_3/darshan-3.0.0-pre2/Install/lib/libdarshan.so:
undefined symbol: __real_PMPI_Gather</p>
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background-color: rgb(255, 252, 254);">
Done</p>
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background-color: rgb(255, 252, 254);">
vulcanlac3{rhedges}632: </p>
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<div><br>
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<div>====================================================</div>
<div><br>
</div>
<div>Richard Hedges</div>
<div>Customer Support and Test - File Systems Project</div>
<div>Development Environment Group - Livermore Computing</div>
<div>Lawrence Livermore National Laboratory</div>
<div>7000 East Avenue, MS L-557</div>
<div>Livermore, CA 94551</div>
<div><br>
</div>
<div>v: (925) 423-2699</div>
<div>f: (925) 423-6961</div>
<div>E: <a class="moz-txt-link-abbreviated" href="mailto:richard-hedges@llnl.gov">richard-hedges@llnl.gov</a></div>
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