[Darshan-users] darshan output from log

[ketan]

Hi,

I tried to copy the share folder manually from darshan source tree to 
darshan-install. Now I get a better output yet the pdf file generation 
is not complete.

[login.ci.uchicago.edu:24]$ ~/darshan-install/bin/darshan-job-summary.pl 
ketan_modftdock_id9643_5-24-42129-16735182948803816265_1.darshan.gz 
--output ~/job-summary.pdf
Slowest unique file time: 0
Slowest shared file time: 0.058647
Total bytes read and written by app (may be incorrect): 243
Total absolute I/O time: 0.058647

gnuplot> set style data histogram
                                  ^
          "counts-eps.gplt", line 7: expecting 'lines', 'points', 
'linespoints', 'dots', 'impulses',
     'yerrorbars', 'xerrorbars', 'xyerrorbars', 'steps', 'fsteps',
     'histeps', 'filledcurves', 'boxes', 'boxerrorbars', 'boxxyerrorbars',
     'vectors', 'financebars', 'candlesticks', 'errorlines', 'xerrorlines',
     'yerrorlines', 'xyerrorlines', 'pm3d'

==> Warning: BoundingBox not found!
          "hist-eps.gplt", line 3: undefined variable: font

EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz 
et al.
!!! Error: 'hist.eps' does not exist!
          "pattern-eps.gplt", line 3: undefined variable: font

EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz 
et al.
!!! Error: 'pattern.eps' does not exist!
          "time-summary-eps.gplt", line 3: undefined variable: font

EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz 
et al.
!!! Error: 'time-summary.eps' does not exist!
          "file-access-read-eps.gplt", line 3: undefined variable: font

EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz 
et al.
!!! Error: 'file-access-read.eps' does not exist!
          "file-access-write-eps.gplt", line 3: undefined variable: font

EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz 
et al.
!!! Error: 'file-access-write.eps' does not exist!
          "file-access-shared-eps.gplt", line 3: undefined variable: font

EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz 
et al.
!!! Error: 'file-access-shared.eps' does not exist!
LaTeX generation (phase1) failed [65280], aborting summary creation.
error log:
loading : Context Support Macros / PDF (2004.03.26)
) (./job-table.tex)
Overfull \hbox (18.76118pt too wide) in paragraph at lines 39--39
  [][]

LaTeX Warning: File `time-summary.pdf' not found on input line 43.


Error: pdflatex (file time-summary.pdf): cannot find image file
  ==> Fatal error occurred, the output PDF file is not finished!


How should I debug this?

Regards,
Ketan


On 5/24/11 12:02 PM, Kevin Harms wrote:
> Ketan,
>
>    Those files (home/ketan/darshan-install/share/*) should have been copied by 'make install'. darshan-job-summary.pl also requires gnuplot-4.2+ and pdflatex.
>
>    You can check<source dir>/util/share and see if the files are there and then try make install and see where it tries to copy them.
>
> kevin
>
> On May 24, 2011, at 11:47 AM, ketan wrote:
>
>> Hello,
>>
>> Now, I have been able to use Darshan as far as generating the Darshan log from the binary execution. However, when I try to generate the output.pdf report as shown in darshan wiki:
>>
>> ~/darshan-install/bin/darshan-job-summary.pl ketan_modftdock_id9643_5-24-42129-16735182948803816265_1.darshan.gz --output ~/job-summary.pdf
>>
>> I get the following:
>>
>> cp: cannot stat `/home/ketan/darshan-install/share/*.gplt': No such file or directory
>> cp: cannot stat `/home/ketan/darshan-install/share/*.tex': No such file or directory
>> Slowest unique file time: 0
>> Slowest shared file time: 0.058647
>> Total bytes read and written by app (may be incorrect): 243
>> Total absolute I/O time: 0.058647
>>          Cannot open load file 'counts-eps.gplt'
>>          line 0: util.c: No such file or directory
>>
>> EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz et al.
>> !!! Error: 'counts.eps' does not exist!
>>          Cannot open load file 'hist-eps.gplt'
>>          line 0: util.c: No such file or directory
>>
>> EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz et al.
>> !!! Error: 'hist.eps' does not exist!
>>          Cannot open load file 'pattern-eps.gplt'
>>          line 0: util.c: No such file or directory
>>
>> EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz et al.
>> !!! Error: 'pattern.eps' does not exist!
>>          Cannot open load file 'time-summary-eps.gplt'
>>          line 0: util.c: No such file or directory
>>
>> EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz et al.
>> !!! Error: 'time-summary.eps' does not exist!
>>          "file-access-read-eps.gplt", line 3: undefined variable: font
>>
>> EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz et al.
>> !!! Error: 'file-access-read.eps' does not exist!
>>          "file-access-write-eps.gplt", line 3: undefined variable: font
>>
>> EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz et al.
>> !!! Error: 'file-access-write.eps' does not exist!
>>          "file-access-shared-eps.gplt", line 3: undefined variable: font
>>
>> EPSTOPDF 2.9.3draft, 2003/04/20 - Copyright 1998-2002 by Sebastian Rahtz et al.
>> !!! Error: 'file-access-shared.eps' does not exist!
>>
>> <does not return??>
>>
>> Any clue where to find the files (templates?) that it is missing?
>>
>> Regards,
>> Ketan
>>
>> _______________________________________________
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>> Darshan-users at lists.mcs.anl.gov
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