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<h3>
Sudheer Chunduri pushed to branch python-job-summary
at <a href="https://xgitlab.cels.anl.gov/darshan/darshan">darshan / darshan</a>
</h3>
<h4>
Commits:
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<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/959529279372c75ba33563ead36c95513f57bac7">95952927</a></strong>
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<span>by Sudheer Chunduri</span>
<i>at 2021-04-07T22:19:53+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">pydarsha/html: include updates to python script that generates job summary report in html
include processing for APXC and APMPI records
</pre>
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<h4>2 changed files:</h4>
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<a href="#17335e2d30ae5073a550154531423ea5328e6bd5">
darshan-util/pydarshan/darshan/cli/summary.py
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<a href="#918b0c06a215f0f26f5f3ec9b529b5c544471e33">
darshan-util/pydarshan/darshan/templates/summary.html
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<h4>Changes:</h4>
<li id="17335e2d30ae5073a550154531423ea5328e6bd5">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/959529279372c75ba33563ead36c95513f57bac7#17335e2d30ae5073a550154531423ea5328e6bd5"><strong>darshan-util/pydarshan/darshan/cli/summary.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -10,13 +10,16 @@ import numpy</td>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pandas</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pytz</span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">sys</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pprint</span></span>
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<td class="diff-line-num new new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pandas</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pd</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">seaborn</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">sns</span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">darshan</span></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">darshan.templates</span></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">setup_parser</span><span class="p">(</span><span class="n" style="color: #333;">parser</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># setup arguments</span></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'input'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'darshan log file'</span><span class="p">,</span> <span class="n" style="color: #333;">nargs</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'?'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'<span class="idiff left right">--</span>input'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'darshan log file'</span><span class="p">,</span> <span class="n" style="color: #333;">nargs</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'?'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'--output'</span><span class="p">,</span> <span class="n" style="color: #333;">action</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'store'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'output file name'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'--verbose'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">''</span><span class="p">,</span> <span class="n" style="color: #333;">action</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'store_true'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'--debug'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">''</span><span class="p">,</span> <span class="n" style="color: #333;">action</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'store_true'</span><span class="p">)</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -149,7 +152,128 @@ def data_transfer_filesystem(report, posix_df, stdio_df):</td>
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<pre style="margin: 0;"> <span id="LC152" class="line" lang="python"> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">fs</span><span class="p">][</span><span class="s" style="color: #d14;">'write_rt'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">fs</span><span class="p">][</span><span class="s" style="color: #d14;">'write'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">/</span> <span class="n" style="color: #333;">total_wr_bytes</span></span>
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150
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153
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="python"></span>
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151
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154
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<pre style="margin: 0;"> <span id="LC154" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">fs_data</span></span>
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155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="python"></span>
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156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">apmpi_process</span><span class="p">(</span><span class="n" style="color: #333;">apmpi_dict</span><span class="p">):</span></span>
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152
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157
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="python"> </span>
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158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="python"> <span class="n" style="color: #333;">header_rec</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">apmpi_dict</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="python"> <span class="n" style="color: #333;">sync_flag</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">header_rec</span><span class="p">[</span><span class="s" style="color: #d14;">"sync_flag"</span><span class="p">]</span></span>
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160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="s" style="color: #d14;">"sync_flag= "</span><span class="p">,</span> <span class="n" style="color: #333;">sync_flag</span><span class="p">)</span></span>
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161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span></span>
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162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="python"> <span class="s" style="color: #d14;">"APMPI Variance in total mpi time: "</span><span class="p">,</span> <span class="n" style="color: #333;">header_rec</span><span class="p">[</span><span class="s" style="color: #d14;">"variance_total_mpitime"</span><span class="p">],</span> <span class="s" style="color: #d14;">"</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="s" style="color: #d14;">"</span></span>
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163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="python"> <span class="p">)</span></span>
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164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">sync_flag</span><span class="p">:</span></span>
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165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span></span>
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166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="python"> <span class="s" style="color: #d14;">"APMPI Variance in total mpi sync time: "</span><span class="p">,</span></span>
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167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="python"> <span class="n" style="color: #333;">header_rec</span><span class="p">[</span><span class="s" style="color: #d14;">"variance_total_mpisynctime"</span><span class="p">],</span></span>
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168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="python"> <span class="p">)</span></span>
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169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="python"></span>
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170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="python"> <span class="n" style="color: #333;">df_apmpi</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pd</span><span class="p">.</span><span class="n" style="color: #333;">DataFrame</span><span class="p">()</span></span>
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171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="python"> <span class="n" style="color: #333;">list_mpiop</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="python"> <span class="n" style="color: #333;">list_rank</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">rec</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">apmpi_dict</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">:]:</span> <span class="c1" style="color: #998; font-style: italic;"># skip the first record which is header record</span></span>
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174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="python"> <span class="n" style="color: #333;">mpi_nonzero_callcount</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">k</span><span class="p">,</span> <span class="n" style="color: #333;">v</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">].</span><span class="n" style="color: #333;">items</span><span class="p">():</span></span>
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<td class="diff-line-num new new_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">k</span><span class="p">.</span><span class="n" style="color: #333;">endswith</span><span class="p">(</span><span class="s" style="color: #d14;">"_CALL_COUNT"</span><span class="p">)</span> <span class="ow" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">v</span> <span class="o" style="font-weight: 600;">></span> <span class="mi" style="color: #099;">0</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="python"> <span class="n" style="color: #333;">mpi_nonzero_callcount</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span><span class="n" style="color: #333;">k</span><span class="p">[:</span> <span class="o" style="font-weight: 600;">-</span><span class="p">(</span><span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="s" style="color: #d14;">"CALL_COUNT"</span><span class="p">))])</span></span>
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178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="python"></span>
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<td class="diff-line-num new new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="python"> <span class="n" style="color: #333;">df_rank</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pd</span><span class="p">.</span><span class="n" style="color: #333;">DataFrame</span><span class="p">()</span></span>
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<td class="diff-line-num new new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">mpiop</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">mpi_nonzero_callcount</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="python"> <span class="n" style="color: #333;">ncall</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span></span>
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182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="python"> <span class="n" style="color: #333;">ncount</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"CALL_COUNT"</span></span>
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183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="python"> <span class="n" style="color: #333;">nsize</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"TOTAL_BYTES"</span></span>
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<td class="diff-line-num new new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="python"> <span class="n" style="color: #333;">h0</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"MSG_SIZE_AGG_0_256"</span></span>
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<td class="diff-line-num new new_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="python"> <span class="n" style="color: #333;">h1</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"MSG_SIZE_AGG_256_1K"</span></span>
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186
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="python"> <span class="n" style="color: #333;">h2</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"MSG_SIZE_AGG_1K_8K"</span></span>
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<td class="diff-line-num new new_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
187
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="python"> <span class="n" style="color: #333;">h3</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"MSG_SIZE_AGG_8K_256K"</span></span>
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<td class="diff-line-num new new_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="python"> <span class="n" style="color: #333;">h4</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"MSG_SIZE_AGG_256K_1M"</span></span>
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<td class="diff-line-num new new_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
189
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="python"> <span class="n" style="color: #333;">h5</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"MSG_SIZE_AGG_1M_PLUS"</span></span>
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<td class="diff-line-num new new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
190
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="python"> <span class="n" style="color: #333;">ntime</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"TOTAL_TIME"</span></span>
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<td class="diff-line-num new new_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
191
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="python"> <span class="n" style="color: #333;">mintime</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"MIN_TIME"</span></span>
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192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="python"> <span class="n" style="color: #333;">maxtime</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"MAX_TIME"</span></span>
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193
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">sync_flag</span><span class="p">:</span></span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="python"> <span class="n" style="color: #333;">totalsync</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="s" style="color: #d14;">"TOTAL_SYNC_TIME"</span></span>
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195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="python"></span>
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<td class="diff-line-num new new_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
196
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{}</span></span>
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<td class="diff-line-num new new_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Rank"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"rank"</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Node_ID"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"node_name"</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
199
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Call"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">ncall</span><span class="p">[:</span><span class="o" style="font-weight: 600;">-</span><span class="mi" style="color: #099;">1</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
200
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">][</span><span class="n" style="color: #333;">ntime</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Count"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">][</span><span class="n" style="color: #333;">ncount</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Bytes"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">].</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="n" style="color: #333;">nsize</span><span class="p">,</span> <span class="bp" style="color: #999;">None</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
203
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<pre style="margin: 0;">+<span id="LC203" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"[0-256B]"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">].</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="n" style="color: #333;">h0</span><span class="p">,</span> <span class="bp" style="color: #999;">None</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
204
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"[1K-8KB]"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">].</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="n" style="color: #333;">h2</span><span class="p">,</span> <span class="bp" style="color: #999;">None</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
205
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"[8K-256KB]"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">].</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="n" style="color: #333;">h3</span><span class="p">,</span> <span class="bp" style="color: #999;">None</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"256K-1MB"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">].</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="n" style="color: #333;">h4</span><span class="p">,</span> <span class="bp" style="color: #999;">None</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"[>1MB]"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">].</span><span class="n" style="color: #333;">get</span><span class="p">(</span><span class="n" style="color: #333;">h5</span><span class="p">,</span> <span class="bp" style="color: #999;">None</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
208
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Min_Time"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">][</span><span class="n" style="color: #333;">mintime</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Max_Time"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">][</span><span class="n" style="color: #333;">maxtime</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="210" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">sync_flag</span> <span class="ow" style="font-weight: 600;">and</span> <span class="p">(</span><span class="n" style="color: #333;">totalsync</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">]):</span></span>
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<td class="diff-line-num new new_line" data-linenumber="211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="python"> <span class="n" style="color: #333;">mpiopstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_SYNC_Time"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">][</span><span class="n" style="color: #333;">totalsync</span><span class="p">]</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
212
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="python"> <span class="n" style="color: #333;">list_mpiop</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span><span class="n" style="color: #333;">mpiopstat</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="python"> <span class="n" style="color: #333;">rankstat</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{}</span></span>
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="python"> <span class="n" style="color: #333;">rankstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Rank"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"rank"</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="python"> <span class="n" style="color: #333;">rankstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Node_ID"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"node_name"</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="python"> <span class="n" style="color: #333;">rankstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Call"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"Total_MPI_time"</span></span>
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="python"> <span class="n" style="color: #333;">rankstat</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">rec</span><span class="p">[</span><span class="s" style="color: #d14;">"all_counters"</span><span class="p">][</span><span class="s" style="color: #d14;">"MPI_TOTAL_COMM_TIME"</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="python"> <span class="n" style="color: #333;">list_rank</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span><span class="n" style="color: #333;">rankstat</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="python"> <span class="n" style="color: #333;">df_rank</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pd</span><span class="p">.</span><span class="n" style="color: #333;">DataFrame</span><span class="p">(</span><span class="n" style="color: #333;">list_rank</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="python"> <span class="n" style="color: #333;">avg_total_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">df_rank</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">].</span><span class="n" style="color: #333;">mean</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC223" class="line" lang="python"> <span class="n" style="color: #333;">max_total_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">df_rank</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">].</span><span class="nb" style="color: #0086b3;">max</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="python"> <span class="n" style="color: #333;">min_total_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">df_rank</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">].</span><span class="nb" style="color: #0086b3;">min</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC225" class="line" lang="python"> <span class="n" style="color: #333;">max_rank</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">df_rank</span><span class="p">.</span><span class="n" style="color: #333;">loc</span><span class="p">[</span><span class="n" style="color: #333;">df_rank</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">].</span><span class="n" style="color: #333;">idxmax</span><span class="p">()][</span><span class="s" style="color: #d14;">"Rank"</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC226" class="line" lang="python"> <span class="n" style="color: #333;">min_rank</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">df_rank</span><span class="p">.</span><span class="n" style="color: #333;">loc</span><span class="p">[</span><span class="n" style="color: #333;">df_rank</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">].</span><span class="n" style="color: #333;">idxmin</span><span class="p">()][</span><span class="s" style="color: #d14;">"Rank"</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># assumption: row index and rank id are same in df_rank </span></span>
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># .. need to check if that is an incorrect assumption</span></span>
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="python"> <span class="n" style="color: #333;">mean_rank</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">(</span></span>
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="python"> <span class="p">(</span><span class="n" style="color: #333;">df_rank</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">df_rank</span><span class="p">[</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">].</span><span class="n" style="color: #333;">mean</span><span class="p">()).</span><span class="nb" style="color: #0086b3;">abs</span><span class="p">().</span><span class="n" style="color: #333;">argsort</span><span class="p">()[:</span><span class="mi" style="color: #099;">1</span><span class="p">][</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="python"> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="python"> <span class="n" style="color: #333;">pd</span><span class="p">.</span><span class="n" style="color: #333;">set_option</span><span class="p">(</span><span class="s" style="color: #d14;">"display.max_rows"</span><span class="p">,</span> <span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="s" style="color: #d14;">"display.max_columns"</span><span class="p">,</span> <span class="bp" style="color: #999;">None</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC233" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC234" class="line" lang="python"> <span class="n" style="color: #333;">list_combined</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">list_mpiop</span> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">list_rank</span></span>
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<pre style="margin: 0;">+<span id="LC235" class="line" lang="python"> <span class="n" style="color: #333;">df_apmpi</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pd</span><span class="p">.</span><span class="n" style="color: #333;">DataFrame</span><span class="p">(</span><span class="n" style="color: #333;">list_combined</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="python"> <span class="n" style="color: #333;">df_apmpi</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">df_apmpi</span><span class="p">.</span><span class="n" style="color: #333;">sort_values</span><span class="p">(</span><span class="n" style="color: #333;">by</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="s" style="color: #d14;">"Rank"</span><span class="p">,</span> <span class="s" style="color: #d14;">"Total_Time"</span><span class="p">],</span> <span class="n" style="color: #333;">ascending</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="bp" style="color: #999;">True</span><span class="p">,</span> <span class="bp" style="color: #999;">False</span><span class="p">])</span></span>
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="python"> <span class="n" style="color: #333;">df_call</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">df_apmpi</span><span class="p">[[</span><span class="s" style="color: #d14;">'Call'</span><span class="p">,</span> <span class="s" style="color: #d14;">'Total_Time'</span><span class="p">]]</span></span>
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238
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<pre style="margin: 0;">+<span id="LC238" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#print("MPI stats for rank with maximum MPI time")#, border_style="blue")</span></span>
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239
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="s" style="color: #d14;">"MPI stats for rank with maximum MPI time</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="s" style="color: #d14;">"</span><span class="p">,</span> <span class="n" style="color: #333;">df_apmpi</span><span class="p">.</span><span class="n" style="color: #333;">loc</span><span class="p">[</span><span class="n" style="color: #333;">df_apmpi</span><span class="p">[</span><span class="s" style="color: #d14;">"Rank"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">==</span> <span class="n" style="color: #333;">max_rank</span><span class="p">])</span></span>
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240
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="s" style="color: #d14;">"</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="s" style="color: #d14;">"</span><span class="p">)</span></span>
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241
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="s" style="color: #d14;">"MPI stats for rank with minimum MPI time"</span><span class="p">)</span><span class="c1" style="color: #998; font-style: italic;"># border_style="blue")</span></span>
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242
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="n" style="color: #333;">df_apmpi</span><span class="p">.</span><span class="n" style="color: #333;">loc</span><span class="p">[</span><span class="n" style="color: #333;">df_apmpi</span><span class="p">[</span><span class="s" style="color: #d14;">"Rank"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">==</span> <span class="n" style="color: #333;">min_rank</span><span class="p">])</span></span>
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243
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<pre style="margin: 0;">+<span id="LC243" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="s" style="color: #d14;">"</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="s" style="color: #d14;">"</span><span class="p">)</span></span>
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244
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<pre style="margin: 0;">+<span id="LC244" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="s" style="color: #d14;">"MPI stats for rank with mean MPI time"</span><span class="p">)</span><span class="c1" style="color: #998; font-style: italic;">#, border_style="blue")</span></span>
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245
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="n" style="color: #333;">df_apmpi</span><span class="p">.</span><span class="n" style="color: #333;">loc</span><span class="p">[</span><span class="n" style="color: #333;">df_apmpi</span><span class="p">[</span><span class="s" style="color: #d14;">"Rank"</span><span class="p">]</span> <span class="o" style="font-weight: 600;">==</span> <span class="n" style="color: #333;">mean_rank</span><span class="p">])</span></span>
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246
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># print(df_apmpi)</span></span>
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247
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#df_apmpi.to_csv('apmpi.csv', index=False)</span></span>
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248
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#df_rank.to_csv('apmpi_rank.csv', index=False)</span></span>
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249
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="python"> </span>
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250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="python"> <span class="n" style="color: #333;">encoded</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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251
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="python"> <span class="n" style="color: #333;">buf</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">io</span><span class="p">.</span><span class="n" style="color: #333;">BytesIO</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="python"> <span class="n" style="color: #333;">fig</span><span class="p">,</span> <span class="n" style="color: #333;">ax</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pyplot</span><span class="p">.</span><span class="n" style="color: #333;">subplots</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="python"></span>
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254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="python"> <span class="n" style="color: #333;">sns_violin</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">sns</span><span class="p">.</span><span class="n" style="color: #333;">violinplot</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"Call"</span><span class="p">,</span> <span class="n" style="color: #333;">y</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">,</span> <span class="n" style="color: #333;">ax</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">ax</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">df_call</span><span class="p">)</span></span>
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255
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="python"> <span class="n" style="color: #333;">sns_violin</span><span class="p">.</span><span class="n" style="color: #333;">set_xticklabels</span><span class="p">(</span><span class="n" style="color: #333;">sns_violin</span><span class="p">.</span><span class="n" style="color: #333;">get_xticklabels</span><span class="p">(),</span> <span class="n" style="color: #333;">rotation</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">60</span><span class="p">,</span> <span class="n" style="color: #333;">size</span><span class="o" style="font-weight: 600;">=</span><span class="mf" style="color: #099;">6.5</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="256" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
256
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="python"> <span class="n" style="color: #333;">sns_violin</span><span class="p">.</span><span class="n" style="color: #333;">set_yticklabels</span><span class="p">(</span><span class="n" style="color: #333;">sns_violin</span><span class="p">.</span><span class="n" style="color: #333;">get_yticks</span><span class="p">(),</span> <span class="n" style="color: #333;">rotation</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="n" style="color: #333;">size</span><span class="o" style="font-weight: 600;">=</span><span class="mf" style="color: #099;">6.5</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="257" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
257
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="python"> <span class="n" style="color: #333;">sns_violin</span><span class="p">.</span><span class="n" style="color: #333;">set_xlabel</span><span class="p">(</span><span class="s" style="color: #d14;">''</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="258" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
258
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="python"> <span class="n" style="color: #333;">sns_violin</span><span class="p">.</span><span class="n" style="color: #333;">set_ylabel</span><span class="p">(</span><span class="s" style="color: #d14;">'Time (seconds)'</span><span class="p">,</span> <span class="n" style="color: #333;">size</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">7</span><span class="p">)</span></span>
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259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#sns.despine();</span></span>
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260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="python"> <span class="n" style="color: #333;">pyplot</span><span class="p">.</span><span class="n" style="color: #333;">savefig</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">format</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'png'</span><span class="p">,</span> <span class="n" style="color: #333;">bbox_inches</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'tight'</span><span class="p">)</span></span>
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261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="python"> <span class="n" style="color: #333;">buf</span><span class="p">.</span><span class="n" style="color: #333;">seek</span><span class="p">(</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="python"> <span class="n" style="color: #333;">encoded</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span><span class="n" style="color: #333;">base64</span><span class="p">.</span><span class="n" style="color: #333;">b64encode</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">.</span><span class="n" style="color: #333;">read</span><span class="p">()))</span></span>
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263
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="python"></span>
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264
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<pre style="margin: 0;">+<span id="LC264" class="line" lang="python"> <span class="n" style="color: #333;">buf</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">io</span><span class="p">.</span><span class="n" style="color: #333;">BytesIO</span><span class="p">()</span></span>
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265
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="python"> <span class="n" style="color: #333;">fig</span><span class="p">,</span> <span class="n" style="color: #333;">ax</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pyplot</span><span class="p">.</span><span class="n" style="color: #333;">subplots</span><span class="p">()</span></span>
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<td class="diff-line-num new new_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
266
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="python"> <span class="n" style="color: #333;">sns_plot</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">sns</span><span class="p">.</span><span class="n" style="color: #333;">scatterplot</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"Rank"</span><span class="p">,</span> <span class="n" style="color: #333;">y</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"Total_Time"</span><span class="p">,</span> <span class="n" style="color: #333;">ax</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">ax</span><span class="p">,</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">df_apmpi</span><span class="p">,</span> <span class="n" style="color: #333;">s</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
267
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="python"> <span class="n" style="color: #333;">sns_plot</span><span class="p">.</span><span class="n" style="color: #333;">set_xticklabels</span><span class="p">(</span><span class="n" style="color: #333;">sns_plot</span><span class="p">.</span><span class="n" style="color: #333;">get_xticklabels</span><span class="p">(),</span> <span class="n" style="color: #333;">rotation</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="n" style="color: #333;">size</span><span class="o" style="font-weight: 600;">=</span><span class="mf" style="color: #099;">6.5</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
268
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<pre style="margin: 0;">+<span id="LC268" class="line" lang="python"> <span class="n" style="color: #333;">sns_plot</span><span class="p">.</span><span class="n" style="color: #333;">set_yticklabels</span><span class="p">(</span><span class="n" style="color: #333;">sns_plot</span><span class="p">.</span><span class="n" style="color: #333;">get_yticks</span><span class="p">(),</span> <span class="n" style="color: #333;">rotation</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="n" style="color: #333;">size</span><span class="o" style="font-weight: 600;">=</span><span class="mf" style="color: #099;">6.5</span><span class="p">)</span></span>
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269
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<pre style="margin: 0;">+<span id="LC269" class="line" lang="python"> <span class="n" style="color: #333;">sns_plot</span><span class="p">.</span><span class="n" style="color: #333;">set_xlabel</span><span class="p">(</span><span class="s" style="color: #d14;">'Rank'</span><span class="p">,</span> <span class="n" style="color: #333;">size</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">8</span><span class="p">)</span></span>
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270
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<pre style="margin: 0;">+<span id="LC270" class="line" lang="python"> <span class="n" style="color: #333;">sns_plot</span><span class="p">.</span><span class="n" style="color: #333;">set_ylabel</span><span class="p">(</span><span class="s" style="color: #d14;">'Time (seconds)'</span><span class="p">,</span> <span class="n" style="color: #333;">size</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">8</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
271
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#sns.despine();</span></span>
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272
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<pre style="margin: 0;">+<span id="LC272" class="line" lang="python"> <span class="n" style="color: #333;">pyplot</span><span class="p">.</span><span class="n" style="color: #333;">savefig</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">format</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'png'</span><span class="p">,</span> <span class="n" style="color: #333;">bbox_inches</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'tight'</span><span class="p">)</span></span>
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273
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="python"> <span class="n" style="color: #333;">buf</span><span class="p">.</span><span class="n" style="color: #333;">seek</span><span class="p">(</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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274
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="python"> <span class="n" style="color: #333;">encoded</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span><span class="n" style="color: #333;">base64</span><span class="p">.</span><span class="n" style="color: #333;">b64encode</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">.</span><span class="n" style="color: #333;">read</span><span class="p">()))</span></span>
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275
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">encoded</span></span>
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276
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<pre style="margin: 0;">+<span id="LC276" class="line" lang="python"> </span>
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153
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277
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<pre style="margin: 0;"> <span id="LC277" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">main</span><span class="p">(</span><span class="n" style="color: #333;">args</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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154
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278
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<pre style="margin: 0;"> <span id="LC278" class="line" lang="python"></span>
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155
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279
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<pre style="margin: 0;"> <span id="LC279" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">args</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -162,6 +286,7 @@ def main(args=None):</td>
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162
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286
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<pre style="margin: 0;"> <span id="LC286" class="line" lang="python"></span>
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163
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<pre style="margin: 0;"> <span id="LC287" class="line" lang="python"> <span class="n" style="color: #333;">variables</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{}</span></span>
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164
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<pre style="margin: 0;"> <span id="LC288" class="line" lang="python"> <span class="n" style="color: #333;">report</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">darshan</span><span class="p">.</span><span class="n" style="color: #333;">DarshanReport</span><span class="p">(</span><span class="n" style="color: #333;">args</span><span class="p">.</span><span class="nb" style="color: #0086b3;">input</span><span class="p">,</span> <span class="n" style="color: #333;">read_all</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">)</span></span>
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289
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<pre style="margin: 0;">+<span id="LC289" class="line" lang="python"> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">info</span><span class="p">()</span></span>
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165
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290
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<pre style="margin: 0;"> <span id="LC290" class="line" lang="python"></span>
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166
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291
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<pre style="margin: 0;"> <span id="LC291" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#</span></span>
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167
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<td class="diff-line-num new_line" data-linenumber="292" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
292
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<pre style="margin: 0;"> <span id="LC292" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># Setup template header variabels</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -192,6 +317,16 @@ def main(args=None):</td>
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192
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317
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<pre style="margin: 0;"> <span id="LC317" class="line" lang="python"> <span class="n" style="color: #333;">stdio_df</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">records</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO'</span><span class="p">].</span><span class="n" style="color: #333;">to_df</span><span class="p">()</span></span>
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193
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<pre style="margin: 0;"> <span id="LC318" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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194
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<pre style="margin: 0;"> <span id="LC319" class="line" lang="python"> <span class="n" style="color: #333;">stdio_df</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">None</span></span>
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<pre style="margin: 0;">+<span id="LC320" class="line" lang="python"> </span>
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<pre style="margin: 0;">+<span id="LC321" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="s" style="color: #d14;">'APXC'</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">modules</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC322" class="line" lang="python"> <span class="n" style="color: #333;">apxc_dict</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">records</span><span class="p">[</span><span class="s" style="color: #d14;">'APXC'</span><span class="p">].</span><span class="n" style="color: #333;">to_dict</span><span class="p">()</span></span>
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323
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<pre style="margin: 0;">+<span id="LC323" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC324" class="line" lang="python"> <span class="n" style="color: #333;">apxc_dict</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">None</span></span>
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325
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<pre style="margin: 0;">+<span id="LC325" class="line" lang="python"></span>
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326
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<pre style="margin: 0;">+<span id="LC326" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="s" style="color: #d14;">'APMPI'</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">modules</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC327" class="line" lang="python"> <span class="n" style="color: #333;">apmpi_dict</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">records</span><span class="p">[</span><span class="s" style="color: #d14;">'APMPI'</span><span class="p">].</span><span class="n" style="color: #333;">to_dict</span><span class="p">()</span></span>
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328
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<pre style="margin: 0;">+<span id="LC328" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC329" class="line" lang="python"> <span class="n" style="color: #333;">apmpi_dict</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">None</span></span>
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330
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<pre style="margin: 0;"> <span id="LC330" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC331" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#</span></span>
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197
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332
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<pre style="margin: 0;"> <span id="LC332" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># Plot I/O cost</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="339" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -204,6 +339,9 @@ def main(args=None):</td>
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204
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339
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<pre style="margin: 0;"> <span id="LC339" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'plot_op_count'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">plot_op_count</span><span class="p">(</span><span class="n" style="color: #333;">posix_df</span><span class="p">,</span> <span class="n" style="color: #333;">mpiio_df</span><span class="p">,</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">).</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">)</span></span>
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205
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340
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<pre style="margin: 0;"> <span id="LC340" class="line" lang="python"></span>
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206
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341
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<pre style="margin: 0;"> <span id="LC341" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'fs_data'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">data_transfer_filesystem</span><span class="p">(</span><span class="n" style="color: #333;">report</span><span class="p">,</span> <span class="n" style="color: #333;">posix_df</span><span class="p">,</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">)</span></span>
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342
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<pre style="margin: 0;">+<span id="LC342" class="line" lang="python"> <span class="n" style="color: #333;">apmpi_encoded</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">apmpi_process</span><span class="p">(</span><span class="n" style="color: #333;">apmpi_dict</span><span class="p">)</span></span>
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343
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<pre style="margin: 0;">+<span id="LC343" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'apmpi_call_time'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">apmpi_encoded</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">].</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">)</span></span>
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344
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<pre style="margin: 0;">+<span id="LC344" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'apmpi_rank_totaltime'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">apmpi_encoded</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">].</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">)</span></span>
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207
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345
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<pre style="margin: 0;"> <span id="LC345" class="line" lang="python"></span>
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208
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346
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<pre style="margin: 0;"> <span id="LC346" class="line" lang="python"> <span class="n" style="color: #333;">template_path</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pkg_resources</span><span class="p">.</span><span class="n" style="color: #333;">path</span><span class="p">(</span><span class="n" style="color: #333;">darshan</span><span class="p">.</span><span class="n" style="color: #333;">templates</span><span class="p">,</span> <span class="s" style="color: #d14;">''</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC347" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">template_path</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">path</span><span class="p">:</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -214,7 +352,6 @@ def main(args=None):</td>
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<pre style="margin: 0;"> <span id="LC352" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="n" style="color: #333;">args</span><span class="p">.</span><span class="n" style="color: #333;">output</span><span class="p">,</span> <span class="s" style="color: #d14;">'w'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">f</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC353" class="line" lang="python"> <span class="n" style="color: #333;">f</span><span class="p">.</span><span class="n" style="color: #333;">write</span><span class="p">(</span><span class="n" style="color: #333;">stream</span><span class="p">.</span><span class="n" style="color: #333;">render</span><span class="p">(</span><span class="s" style="color: #d14;">'html'</span><span class="p">))</span></span>
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<pre style="margin: 0;"> <span id="LC354" class="line" lang="python"> <span class="n" style="color: #333;">f</span><span class="p">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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<pre style="margin: 0;">-<span id="LC217" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC355" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span></span>
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<pre style="margin: 0;"> <span id="LC356" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC357" class="line" lang="python"><span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">__name__</span> <span class="o" style="font-weight: 600;">==</span> <span class="s" style="color: #d14;">"__main__"</span><span class="p">:</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -357,5 +357,28 @@</td>
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<pre style="margin: 0;">+<span id="LC360" class="line" lang="html"><span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel panel-primary"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC362" class="line" lang="html"> <span class="nt" style="color: #000080;"><h4</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-title"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC366" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">id=</span><span class="s" style="color: #d14;">"collapse1"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-collapse collapse in"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC369" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"row"</span><span class="nt" style="color: #000080;">></span></span>
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370
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<pre style="margin: 0;">+<span id="LC370" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-6"</span><span class="nt" style="color: #000080;">></span></span>
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371
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<pre style="margin: 0;">+<span id="LC371" class="line" lang="html"> <span class="nt" style="color: #000080;"><img</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"img-rounded"</span> <span class="na" style="color: #008080;">alt=</span><span class="s" style="color: #d14;">"APMPI-call-times"</span> <span class="na" style="color: #008080;">src=</span><span class="s" style="color: #d14;">"data:image/png;base64,${var.apmpi_call_time}"</span><span class="nt" style="color: #000080;">/></span></span>
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372
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<pre style="margin: 0;">+<span id="LC372" class="line" lang="html"> <span class="nt" style="color: #000080;"></div></span></span>
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373
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<pre style="margin: 0;">+<span id="LC373" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-6"</span><span class="nt" style="color: #000080;">></span></span>
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374
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<pre style="margin: 0;">+<span id="LC374" class="line" lang="html"> <span class="nt" style="color: #000080;"><img</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"img-rounded"</span> <span class="na" style="color: #008080;">alt=</span><span class="s" style="color: #d14;">"APMPI-rank-totaltimes"</span> <span class="na" style="color: #008080;">src=</span><span class="s" style="color: #d14;">"data:image/png;base64,${var.apmpi_rank_totaltime}"</span><span class="nt" style="color: #000080;">/></span></span>
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375
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