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<h3>
Kevin Harms pushed to branch python-job-summary
at <a href="https://xgitlab.cels.anl.gov/darshan/darshan">darshan / darshan</a>
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<h4>
Commits:
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<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/01e7d4ed21dda9d57ce70a2e1091cdfc120f4e57">01e7d4ed</a></strong>
<div>
<span>by Kevin Harms</span>
<i>at 2021-04-05T21:50:09+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Initial WIP progress on python based darshan-job-summary. Uses an HTML tempalte and Genshi to generate an HTML report with embedded graphs.
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<h4>3 changed files:</h4>
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darshan-util/pydarshan/darshan/cli/summary.py
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darshan-util/pydarshan/darshan/templates/__init__.py
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darshan-util/pydarshan/darshan/templates/summary.html
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<h4>Changes:</h4>
<li id="17335e2d30ae5073a550154531423ea5328e6bd5">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/01e7d4ed21dda9d57ce70a2e1091cdfc120f4e57#17335e2d30ae5073a550154531423ea5328e6bd5"><strong>darshan-util/pydarshan/darshan/cli/summary.py</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">argparse</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">base64</span></span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">datetime</span></span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">genshi.template</span></span>
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5
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">importlib.resources</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pkg_resources</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">io</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">matplotlib</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">matplotlib.pyplot</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pyplot</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">numpy</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pandas</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pytz</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">sys</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">darshan</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">darshan.templates</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">setup_parser</span><span class="p">(</span><span class="n" style="color: #333;">parser</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># setup arguments</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'input'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'darshan log file'</span><span class="p">,</span> <span class="n" style="color: #333;">nargs</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'?'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'--output'</span><span class="p">,</span> <span class="n" style="color: #333;">action</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'store'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'output file name'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'--verbose'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">''</span><span class="p">,</span> <span class="n" style="color: #333;">action</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'store_true'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'--debug'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">''</span><span class="p">,</span> <span class="n" style="color: #333;">action</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'store_true'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">plot_io_cost</span><span class="p">(</span><span class="n" style="color: #333;">posix_df</span><span class="p">,</span> <span class="n" style="color: #333;">mpiio_df</span><span class="p">,</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">,</span> <span class="n" style="color: #333;">runtime</span><span class="p">,</span> <span class="n" style="color: #333;">nprocs</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="python"> <span class="n" style="color: #333;">buf</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">io</span><span class="p">.</span><span class="n" style="color: #333;">BytesIO</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="python"> <span class="n" style="color: #333;">fig</span><span class="p">,</span> <span class="n" style="color: #333;">ax</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pyplot</span><span class="p">.</span><span class="n" style="color: #333;">subplots</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="python"> <span class="n" style="color: #333;">labels</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="python"> <span class="n" style="color: #333;">r_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="python"> <span class="n" style="color: #333;">w_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="python"> <span class="n" style="color: #333;">m_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="python"> <span class="n" style="color: #333;">o_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[]</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">posix_df</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="python"> <span class="n" style="color: #333;">s</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">posix_df</span><span class="p">[</span><span class="s" style="color: #d14;">'fcounters'</span><span class="p">].</span><span class="nb" style="color: #0086b3;">sum</span><span class="p">(</span><span class="n" style="color: #333;">axis</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="python"> </span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="python"> <span class="n" style="color: #333;">labels</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span><span class="s" style="color: #d14;">'POSIX'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="python"> <span class="n" style="color: #333;">r_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_F_READ_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="python"> <span class="n" style="color: #333;">w_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_F_WRITE_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="python"> <span class="n" style="color: #333;">m_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_F_META_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="python"> <span class="n" style="color: #333;">o_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_F_READ_TIME'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_F_WRITE_TIME'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_F_META_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">mpiio_df</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="python"> <span class="n" style="color: #333;">s</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiio_df</span><span class="p">[</span><span class="s" style="color: #d14;">'fcounters'</span><span class="p">].</span><span class="nb" style="color: #0086b3;">sum</span><span class="p">(</span><span class="n" style="color: #333;">axis</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="python"> </span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="python"> <span class="n" style="color: #333;">labels</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span><span class="s" style="color: #d14;">'MPI-IO'</span><span class="p">)</span></span>
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48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="python"> <span class="n" style="color: #333;">r_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_F_READ_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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49
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="python"> <span class="n" style="color: #333;">w_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_F_WRITE_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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50
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="python"> <span class="n" style="color: #333;">m_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_F_META_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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51
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="python"> <span class="n" style="color: #333;">o_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_F_READ_TIME'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_F_WRITE_TIME'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_F_META_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="python"> <span class="n" style="color: #333;">s</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">[</span><span class="s" style="color: #d14;">'fcounters'</span><span class="p">].</span><span class="nb" style="color: #0086b3;">sum</span><span class="p">(</span><span class="n" style="color: #333;">axis</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="python"> </span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="python"> <span class="n" style="color: #333;">labels</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span><span class="s" style="color: #d14;">'STDIO'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="python"> <span class="n" style="color: #333;">r_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_F_READ_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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58
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="python"> <span class="n" style="color: #333;">w_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_F_WRITE_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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59
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="python"> <span class="n" style="color: #333;">m_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_F_META_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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60
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="python"> <span class="n" style="color: #333;">o_time</span><span class="p">.</span><span class="n" style="color: #333;">append</span><span class="p">(</span> <span class="p">(</span><span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_F_READ_TIME'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_F_WRITE_TIME'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_F_META_TIME'</span><span class="p">])</span> <span class="o" style="font-weight: 600;">/</span> <span class="nb" style="color: #0086b3;">float</span><span class="p">(</span><span class="n" style="color: #333;">runtime</span> <span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">nprocs</span><span class="p">))</span> <span class="o" style="font-weight: 600;">*</span> <span class="mf" style="color: #099;">100.0</span> <span class="p">)</span></span>
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61
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="python"></span>
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62
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="python"></span>
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63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">bar</span><span class="p">(</span><span class="n" style="color: #333;">labels</span><span class="p">,</span> <span class="n" style="color: #333;">r_time</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Read'</span><span class="p">,</span> <span class="n" style="color: #333;">color</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'purple'</span><span class="p">)</span></span>
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64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">bar</span><span class="p">(</span><span class="n" style="color: #333;">labels</span><span class="p">,</span> <span class="n" style="color: #333;">w_time</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Write'</span><span class="p">,</span> <span class="n" style="color: #333;">color</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'green'</span><span class="p">,</span> <span class="n" style="color: #333;">bottom</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">r_time</span><span class="p">)</span></span>
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65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">bar</span><span class="p">(</span><span class="n" style="color: #333;">labels</span><span class="p">,</span> <span class="n" style="color: #333;">m_time</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Metadata'</span><span class="p">,</span> <span class="n" style="color: #333;">color</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'blue'</span><span class="p">,</span> <span class="n" style="color: #333;">bottom</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="n" style="color: #333;">a</span><span class="o" style="font-weight: 600;">+</span><span class="n" style="color: #333;">b</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">a</span><span class="p">,</span><span class="n" style="color: #333;">b</span> <span class="ow" style="font-weight: 600;">in</span> <span class="nb" style="color: #0086b3;">zip</span><span class="p">(</span><span class="n" style="color: #333;">r_time</span><span class="p">,</span><span class="n" style="color: #333;">w_time</span><span class="p">)])</span></span>
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66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">bar</span><span class="p">(</span><span class="n" style="color: #333;">labels</span><span class="p">,</span> <span class="n" style="color: #333;">o_time</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Other (incluing application compute)'</span><span class="p">,</span> <span class="n" style="color: #333;">color</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'orange'</span><span class="p">,</span> <span class="n" style="color: #333;">bottom</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="n" style="color: #333;">a</span><span class="o" style="font-weight: 600;">+</span><span class="n" style="color: #333;">b</span><span class="o" style="font-weight: 600;">+</span><span class="n" style="color: #333;">c</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">a</span><span class="p">,</span><span class="n" style="color: #333;">b</span><span class="p">,</span><span class="n" style="color: #333;">c</span> <span class="ow" style="font-weight: 600;">in</span> <span class="nb" style="color: #0086b3;">zip</span> <span class="p">(</span><span class="n" style="color: #333;">r_time</span><span class="p">,</span><span class="n" style="color: #333;">w_time</span><span class="p">,</span><span class="n" style="color: #333;">m_time</span><span class="p">)])</span></span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="python"></span>
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68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="python"></span>
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69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">set_ylabel</span><span class="p">(</span><span class="s" style="color: #d14;">"Percentage of runtime"</span><span class="p">)</span></span>
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70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">set_title</span><span class="p">(</span><span class="s" style="color: #d14;">"Average I/O cost per process"</span><span class="p">)</span></span>
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71
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">legend</span><span class="p">(</span><span class="n" style="color: #333;">loc</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"upper right"</span><span class="p">)</span></span>
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72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="python"> <span class="n" style="color: #333;">pyplot</span><span class="p">.</span><span class="n" style="color: #333;">savefig</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">format</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'png'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="python"> <span class="n" style="color: #333;">buf</span><span class="p">.</span><span class="n" style="color: #333;">seek</span><span class="p">(</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="python"> <span class="n" style="color: #333;">encoded</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">base64</span><span class="p">.</span><span class="n" style="color: #333;">b64encode</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">.</span><span class="n" style="color: #333;">read</span><span class="p">())</span></span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">encoded</span></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">plot_op_count</span><span class="p">(</span><span class="n" style="color: #333;">posix_df</span><span class="p">,</span> <span class="n" style="color: #333;">mpiio_df</span><span class="p">,</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="python"> <span class="n" style="color: #333;">buf</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">io</span><span class="p">.</span><span class="n" style="color: #333;">BytesIO</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="python"> <span class="n" style="color: #333;">fig</span><span class="p">,</span> <span class="n" style="color: #333;">ax</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pyplot</span><span class="p">.</span><span class="n" style="color: #333;">subplots</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="python"> <span class="n" style="color: #333;">labels</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="s" style="color: #d14;">'Read'</span><span class="p">,</span> <span class="s" style="color: #d14;">'Write'</span><span class="p">,</span> <span class="s" style="color: #d14;">'Open'</span><span class="p">,</span> <span class="s" style="color: #d14;">'Stat'</span><span class="p">,</span> <span class="s" style="color: #d14;">'Seek'</span><span class="p">,</span> <span class="s" style="color: #d14;">'Mmap'</span><span class="p">,</span> <span class="s" style="color: #d14;">'Fsync'</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="python"> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">arange</span><span class="p">(</span><span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="n" style="color: #333;">labels</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="python"> <span class="n" style="color: #333;">bwidth</span> <span class="o" style="font-weight: 600;">=</span> <span class="mf" style="color: #099;">0.25</span></span>
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">posix_df</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="python"> <span class="n" style="color: #333;">s</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">posix_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="nb" style="color: #0086b3;">sum</span><span class="p">(</span><span class="n" style="color: #333;">axis</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="python"> <span class="n" style="color: #333;">vals</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_READS'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_WRITES'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_OPENS'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_STATS'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_SEEKS'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_MMAPS'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_FSYNCS'</span><span class="p">]</span><span class="o" style="font-weight: 600;">+</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_FDSYNCS'</span><span class="p">]]</span></span>
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">bar</span><span class="p">(</span><span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">-</span> <span class="mi" style="color: #099;">3</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">bwidth</span><span class="o" style="font-weight: 600;">/</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="n" style="color: #333;">vals</span><span class="p">,</span> <span class="n" style="color: #333;">bwidth</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'POSIX'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">mpiio_df</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="python"> <span class="n" style="color: #333;">s</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">mpiio_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="nb" style="color: #0086b3;">sum</span><span class="p">(</span><span class="n" style="color: #333;">axis</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="python"> <span class="n" style="color: #333;">vals</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_INDEP_READS'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_INDEP_WRITES'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_INDEP_OPENS'</span><span class="p">],</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_SYNCS'</span><span class="p">]]</span></span>
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94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">bar</span><span class="p">(</span><span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">bwidth</span><span class="o" style="font-weight: 600;">/</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="n" style="color: #333;">vals</span><span class="p">,</span> <span class="n" style="color: #333;">bwidth</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'MPI-IO Indep'</span><span class="p">)</span></span>
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95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="python"> <span class="n" style="color: #333;">vals</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_COLL_READS'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_COLL_WRITES'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_COLL_OPENS'</span><span class="p">],</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'MPIIO_SYNCS'</span><span class="p">]]</span></span>
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96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">bar</span><span class="p">(</span><span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">bwidth</span><span class="o" style="font-weight: 600;">/</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="n" style="color: #333;">vals</span><span class="p">,</span> <span class="n" style="color: #333;">bwidth</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'MPI-IO Coll'</span><span class="p">)</span></span>
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97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="python"></span>
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98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">:</span></span>
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99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="python"> <span class="n" style="color: #333;">s</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="nb" style="color: #0086b3;">sum</span><span class="p">(</span><span class="n" style="color: #333;">axis</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="python"> <span class="n" style="color: #333;">vals</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_READS'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_WRITES'</span><span class="p">],</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_OPENS'</span><span class="p">],</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_SEEKS'</span><span class="p">],</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="n" style="color: #333;">s</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_FLUSHES'</span><span class="p">]]</span></span>
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101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">bar</span><span class="p">(</span><span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">3</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">bwidth</span><span class="o" style="font-weight: 600;">/</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="n" style="color: #333;">vals</span><span class="p">,</span> <span class="n" style="color: #333;">bwidth</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'STDIO'</span><span class="p">)</span></span>
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102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="python"></span>
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103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">set_ylabel</span><span class="p">(</span><span class="s" style="color: #d14;">"Ops (Total, All Processes)"</span><span class="p">)</span></span>
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104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">set_title</span><span class="p">(</span><span class="s" style="color: #d14;">"I/O Operations Counts"</span><span class="p">)</span></span>
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105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">set_xticks</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">)</span></span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">set_xticklabels</span><span class="p">(</span><span class="n" style="color: #333;">labels</span><span class="p">)</span></span>
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107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="python"> <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">legend</span><span class="p">(</span><span class="n" style="color: #333;">loc</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"upper right"</span><span class="p">)</span></span>
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108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="python"> <span class="n" style="color: #333;">pyplot</span><span class="p">.</span><span class="n" style="color: #333;">savefig</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">format</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'png'</span><span class="p">)</span></span>
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109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="python"> <span class="n" style="color: #333;">buf</span><span class="p">.</span><span class="n" style="color: #333;">seek</span><span class="p">(</span><span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="python"> <span class="n" style="color: #333;">encoded</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">base64</span><span class="p">.</span><span class="n" style="color: #333;">b64encode</span><span class="p">(</span><span class="n" style="color: #333;">buf</span><span class="p">.</span><span class="n" style="color: #333;">read</span><span class="p">())</span></span>
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111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">encoded</span></span>
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="python"></span>
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113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">data_transfer_filesystem</span><span class="p">(</span><span class="n" style="color: #333;">report</span><span class="p">,</span> <span class="n" style="color: #333;">posix_df</span><span class="p">,</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">):</span></span>
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114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="python"></span>
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115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="python"> <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">collections</span></span>
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116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="python"> <span class="n" style="color: #333;">fs_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">collections</span><span class="p">.</span><span class="n" style="color: #333;">defaultdict</span><span class="p">(</span><span class="k" style="font-weight: 600;">lambda</span><span class="p">:</span> <span class="p">{</span><span class="s" style="color: #d14;">'read'</span><span class="p">:</span><span class="mi" style="color: #099;">0</span><span class="p">,</span><span class="s" style="color: #d14;">'write'</span><span class="p">:</span><span class="mi" style="color: #099;">0</span><span class="p">,</span><span class="s" style="color: #d14;">'read_rt'</span><span class="p">:</span><span class="mf" style="color: #099;">0.</span><span class="p">,</span><span class="s" style="color: #d14;">'write_rt'</span><span class="p">:</span><span class="mf" style="color: #099;">0.</span><span class="p">})</span></span>
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117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="python"> <span class="n" style="color: #333;">total_rd_bytes</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="python"> <span class="n" style="color: #333;">total_wr_bytes</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="python"></span>
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120
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">posix_df</span><span class="p">:</span></span>
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121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="python"> <span class="n" style="color: #333;">posix_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">loc</span><span class="p">[:,</span><span class="s" style="color: #d14;">'mount'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'Unknown'</span></span>
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122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="python"> <span class="n" style="color: #333;">posix_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">loc</span><span class="p">[:,</span><span class="s" style="color: #d14;">'mtype'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'Unknown'</span></span>
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123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">index</span><span class="p">,</span> <span class="n" style="color: #333;">row</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">posix_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">iterrows</span><span class="p">():</span></span>
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124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="python"> <span class="n" style="color: #333;">total_rd_bytes</span> <span class="o" style="font-weight: 600;">+=</span> <span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_BYTES_READ'</span><span class="p">]</span></span>
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125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="python"> <span class="n" style="color: #333;">total_wr_bytes</span> <span class="o" style="font-weight: 600;">+=</span> <span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_BYTES_WRITTEN'</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">m</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">mounts</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">name_records</span><span class="p">[</span><span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'id'</span><span class="p">]].</span><span class="n" style="color: #333;">startswith</span><span class="p">(</span><span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]):</span></span>
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128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="python"> <span class="n" style="color: #333;">posix_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">at</span><span class="p">[</span><span class="n" style="color: #333;">index</span><span class="p">,</span> <span class="s" style="color: #d14;">'mount'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="python"> <span class="n" style="color: #333;">posix_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">at</span><span class="p">[</span><span class="n" style="color: #333;">index</span><span class="p">,</span> <span class="s" style="color: #d14;">'mtype'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span></span>
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130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="python"> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]][</span><span class="s" style="color: #d14;">'read'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">+=</span> <span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_BYTES_READ'</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="python"> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]][</span><span class="s" style="color: #d14;">'write'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">+=</span> <span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX_BYTES_WRITTEN'</span><span class="p">]</span></span>
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132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="python"> <span class="k" style="font-weight: 600;">break</span></span>
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133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="python"> <span class="n" style="color: #333;">stdio_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">loc</span><span class="p">[:,</span><span class="s" style="color: #d14;">'mount'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'Unknown'</span></span>
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<td class="diff-line-num new new_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="python"> <span class="n" style="color: #333;">stdio_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">loc</span><span class="p">[:,</span><span class="s" style="color: #d14;">'mtype'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'Unknown'</span></span>
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136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">index</span><span class="p">,</span> <span class="n" style="color: #333;">row</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">iterrows</span><span class="p">():</span></span>
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<td class="diff-line-num new new_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="python"> <span class="n" style="color: #333;">total_rd_bytes</span> <span class="o" style="font-weight: 600;">+=</span> <span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_BYTES_READ'</span><span class="p">]</span></span>
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138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="python"> <span class="n" style="color: #333;">total_wr_bytes</span> <span class="o" style="font-weight: 600;">+=</span> <span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_BYTES_WRITTEN'</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">m</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">mounts</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">name_records</span><span class="p">[</span><span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'id'</span><span class="p">]].</span><span class="n" style="color: #333;">startswith</span><span class="p">(</span><span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]):</span></span>
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<td class="diff-line-num new new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="python"> <span class="n" style="color: #333;">stdio_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">at</span><span class="p">[</span><span class="n" style="color: #333;">index</span><span class="p">,</span> <span class="s" style="color: #d14;">'mount'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span></span>
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142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="python"> <span class="n" style="color: #333;">stdio_df</span><span class="p">[</span><span class="s" style="color: #d14;">'counters'</span><span class="p">].</span><span class="n" style="color: #333;">at</span><span class="p">[</span><span class="n" style="color: #333;">index</span><span class="p">,</span> <span class="s" style="color: #d14;">'mtype'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">]</span></span>
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143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="python"> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]][</span><span class="s" style="color: #d14;">'read'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">+=</span> <span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_BYTES_READ'</span><span class="p">]</span></span>
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144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="python"> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">m</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]][</span><span class="s" style="color: #d14;">'write'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">+=</span> <span class="n" style="color: #333;">row</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO_BYTES_WRITTEN'</span><span class="p">]</span></span>
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145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="python"> <span class="k" style="font-weight: 600;">break</span></span>
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146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="python"></span>
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147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">fs</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">fs_data</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="python"> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">fs</span><span class="p">][</span><span class="s" style="color: #d14;">'read_rt'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">fs</span><span class="p">][</span><span class="s" style="color: #d14;">'read'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">/</span> <span class="n" style="color: #333;">total_rd_bytes</span></span>
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149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="python"> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">fs</span><span class="p">][</span><span class="s" style="color: #d14;">'write_rt'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">fs_data</span><span class="p">[</span><span class="n" style="color: #333;">fs</span><span class="p">][</span><span class="s" style="color: #d14;">'write'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">/</span> <span class="n" style="color: #333;">total_wr_bytes</span></span>
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150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="python"></span>
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151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">fs_data</span></span>
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152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="python"> </span>
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153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">main</span><span class="p">(</span><span class="n" style="color: #333;">args</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">):</span></span>
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154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="python"></span>
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155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">args</span> <span class="ow" style="font-weight: 600;">is</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>
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156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="python"> <span class="n" style="color: #333;">parser</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">argparse</span><span class="p">.</span><span class="n" style="color: #333;">ArgumentParser</span><span class="p">(</span><span class="n" style="color: #333;">description</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">''</span><span class="p">)</span></span>
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157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="python"> <span class="n" style="color: #333;">setup_parser</span><span class="p">(</span><span class="n" style="color: #333;">parser</span><span class="p">)</span></span>
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158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="python"> <span class="n" style="color: #333;">args</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">parse_args</span><span class="p">()</span></span>
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159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="python"></span>
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160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">args</span><span class="p">.</span><span class="n" style="color: #333;">debug</span><span class="p">:</span></span>
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161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="n" style="color: #333;">args</span><span class="p">)</span></span>
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162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="python"></span>
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163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="python"> <span class="n" style="color: #333;">variables</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{}</span></span>
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164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="python"> <span class="n" style="color: #333;">report</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">darshan</span><span class="p">.</span><span class="n" style="color: #333;">DarshanReport</span><span class="p">(</span><span class="n" style="color: #333;">args</span><span class="p">.</span><span class="nb" style="color: #0086b3;">input</span><span class="p">,</span> <span class="n" style="color: #333;">read_all</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">)</span></span>
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165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="python"></span>
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166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#</span></span>
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167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># Setup template header variabels</span></span>
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168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#</span></span>
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169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'exe'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">metadata</span><span class="p">[</span><span class="s" style="color: #d14;">'exe'</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'date'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">datetime</span><span class="p">.</span><span class="n" style="color: #333;">datetime</span><span class="p">.</span><span class="n" style="color: #333;">fromtimestamp</span><span class="p">(</span><span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">metadata</span><span class="p">[</span><span class="s" style="color: #d14;">'job'</span><span class="p">][</span><span class="s" style="color: #d14;">'start_time'</span><span class="p">],</span> <span class="n" style="color: #333;">pytz</span><span class="p">.</span><span class="n" style="color: #333;">utc</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'jid'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">metadata</span><span class="p">[</span><span class="s" style="color: #d14;">'job'</span><span class="p">][</span><span class="s" style="color: #d14;">'jobid'</span><span class="p">]</span></span>
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172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'uid'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">metadata</span><span class="p">[</span><span class="s" style="color: #d14;">'job'</span><span class="p">][</span><span class="s" style="color: #d14;">'uid'</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'nprocs'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">metadata</span><span class="p">[</span><span class="s" style="color: #d14;">'job'</span><span class="p">][</span><span class="s" style="color: #d14;">'nprocs'</span><span class="p">]</span></span>
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<td class="diff-line-num new new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="python"> <span class="n" style="color: #333;">etime</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">int</span><span class="p">(</span><span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">metadata</span><span class="p">[</span><span class="s" style="color: #d14;">'job'</span><span class="p">][</span><span class="s" style="color: #d14;">'end_time'</span><span class="p">])</span></span>
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<td class="diff-line-num new new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="python"> <span class="n" style="color: #333;">stime</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">int</span><span class="p">(</span><span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">metadata</span><span class="p">[</span><span class="s" style="color: #d14;">'job'</span><span class="p">][</span><span class="s" style="color: #d14;">'start_time'</span><span class="p">])</span></span>
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<td class="diff-line-num new new_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">etime</span> <span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">stime</span><span class="p">:</span></span>
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177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'runtime'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">etime</span> <span class="o" style="font-weight: 600;">-</span> <span class="n" style="color: #333;">stime</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span></span>
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178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'runtime'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="python"></span>
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181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="s" style="color: #d14;">'POSIX'</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">modules</span><span class="p">:</span></span>
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182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="python"> <span class="n" style="color: #333;">posix_df</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">records</span><span class="p">[</span><span class="s" style="color: #d14;">'POSIX'</span><span class="p">].</span><span class="n" style="color: #333;">to_df</span><span class="p">()</span></span>
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183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="python"> <span class="n" style="color: #333;">posix_df</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">None</span></span>
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185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="python"></span>
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186
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="s" style="color: #d14;">'MPI-IO'</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">modules</span><span class="p">:</span></span>
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187
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="python"> <span class="n" style="color: #333;">mpiio_df</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">records</span><span class="p">[</span><span class="s" style="color: #d14;">'MPI-IO'</span><span class="p">].</span><span class="n" style="color: #333;">to_df</span><span class="p">()</span></span>
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188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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189
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="python"> <span class="n" style="color: #333;">mpiio_df</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">None</span></span>
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190
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="python"> </span>
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191
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="s" style="color: #d14;">'STDIO'</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">modules</span><span class="p">:</span></span>
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192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="python"> <span class="n" style="color: #333;">stdio_df</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">report</span><span class="p">.</span><span class="n" style="color: #333;">records</span><span class="p">[</span><span class="s" style="color: #d14;">'STDIO'</span><span class="p">].</span><span class="n" style="color: #333;">to_df</span><span class="p">()</span></span>
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193
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="python"> <span class="n" style="color: #333;">stdio_df</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">None</span></span>
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195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># Plot I/O cost</span></span>
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198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#</span></span>
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199
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'plot_io_cost'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">plot_io_cost</span><span class="p">(</span><span class="n" style="color: #333;">posix_df</span><span class="p">,</span> <span class="n" style="color: #333;">mpiio_df</span><span class="p">,</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">int</span><span class="p">(</span><span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'runtime'</span><span class="p">]),</span> <span class="nb" style="color: #0086b3;">int</span><span class="p">(</span><span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'nprocs'</span><span class="p">])).</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#</span></span>
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202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># Plot I/O counts</span></span>
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203
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<pre style="margin: 0;">+<span id="LC203" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;">#</span></span>
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204
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'plot_op_count'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">plot_op_count</span><span class="p">(</span><span class="n" style="color: #333;">posix_df</span><span class="p">,</span> <span class="n" style="color: #333;">mpiio_df</span><span class="p">,</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">).</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">)</span></span>
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205
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="python"></span>
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206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="python"> <span class="n" style="color: #333;">variables</span><span class="p">[</span><span class="s" style="color: #d14;">'fs_data'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">data_transfer_filesystem</span><span class="p">(</span><span class="n" style="color: #333;">report</span><span class="p">,</span> <span class="n" style="color: #333;">posix_df</span><span class="p">,</span> <span class="n" style="color: #333;">stdio_df</span><span class="p">)</span></span>
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207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="python"></span>
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208
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="python"> <span class="n" style="color: #333;">template_path</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pkg_resources</span><span class="p">.</span><span class="n" style="color: #333;">path</span><span class="p">(</span><span class="n" style="color: #333;">darshan</span><span class="p">.</span><span class="n" style="color: #333;">templates</span><span class="p">,</span> <span class="s" style="color: #d14;">''</span><span class="p">)</span></span>
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209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">template_path</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">path</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="python"> <span class="n" style="color: #333;">loader</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">genshi</span><span class="p">.</span><span class="n" style="color: #333;">template</span><span class="p">.</span><span class="n" style="color: #333;">TemplateLoader</span><span class="p">(</span><span class="nb" style="color: #0086b3;">str</span><span class="p">(</span><span class="n" style="color: #333;">path</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="python"> <span class="n" style="color: #333;">template</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">loader</span><span class="p">.</span><span class="n" style="color: #333;">load</span><span class="p">(</span><span class="s" style="color: #d14;">'summary.html'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="python"></span>
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213
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="python"> <span class="n" style="color: #333;">stream</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">template</span><span class="p">.</span><span class="n" style="color: #333;">generate</span><span class="p">(</span><span class="n" style="color: #333;">title</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Darshan Job Summary'</span><span class="p">,</span> <span class="n" style="color: #333;">var</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">variables</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="n" style="color: #333;">args</span><span class="p">.</span><span class="n" style="color: #333;">output</span><span class="p">,</span> <span class="s" style="color: #d14;">'w'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">f</span><span class="p">:</span></span>
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215
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="python"> <span class="n" style="color: #333;">f</span><span class="p">.</span><span class="n" style="color: #333;">write</span><span class="p">(</span><span class="n" style="color: #333;">stream</span><span class="p">.</span><span class="n" style="color: #333;">render</span><span class="p">(</span><span class="s" style="color: #d14;">'html'</span><span class="p">))</span></span>
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216
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="python"> <span class="n" style="color: #333;">f</span><span class="p">.</span><span class="n" style="color: #333;">close</span><span class="p">()</span></span>
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217
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="python"></span>
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218
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span></span>
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219
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="python"></span>
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220
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="python"><span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">__name__</span> <span class="o" style="font-weight: 600;">==</span> <span class="s" style="color: #d14;">"__main__"</span><span class="p">:</span></span>
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221
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="python"> <span class="n" style="color: #333;">main</span><span class="p">()</span></span></pre>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="html"><span class="nt" style="color: #000080;"><html</span> <span class="na" style="color: #008080;">lang=</span><span class="s" style="color: #d14;">"en"</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="html"> <span class="na" style="color: #008080;">xmlns=</span><span class="s" style="color: #d14;">"http://www.w3.org/1999/xhtml"</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="html"> <span class="na" style="color: #008080;">xmlns:py=</span><span class="s" style="color: #d14;">"http://genshi.edgewall.org/"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="html"> <span class="nt" style="color: #000080;"><title></span>Darshan Report<span class="nt" style="color: #000080;"></title></span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="html"><span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel panel-primary"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-heading"</span><span class="nt" style="color: #000080;">></span>Darshan Summary Report for <span class="nt" style="color: #000080;"><b></span>${var.exe.split()[0].split('/')[-1]}<span class="nt" style="color: #000080;"></b></span> on ${var.date.date()}<span class="nt" style="color: #000080;"></div></span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-body"</span><span class="nt" style="color: #000080;">></span>${var.exe}<span class="nt" style="color: #000080;"></div></span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="html"><span class="nt" style="color: #000080;"></div></span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="html"><span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"container"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="html"> <span class="nt" style="color: #000080;"><table</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"table"</span><span class="nt" style="color: #000080;">></span></span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="html"> <span class="nt" style="color: #000080;"><thead></span></span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Jobid<span class="nt" style="color: #000080;"></th></span></span>
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25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>uid<span class="nt" style="color: #000080;"></th></span></span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>processes<span class="nt" style="color: #000080;"></th></span></span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>runtime (seconds)<span class="nt" style="color: #000080;"></th></span></span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="html"> <span class="nt" style="color: #000080;"></thead></span></span>
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30
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="html"> <span class="nt" style="color: #000080;"><tbody></span></span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>${var.jid}<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>${var.uid}<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>${var.nprocs}<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>${var.runtime}<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="html"><span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel panel-default"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-heading"</span><span class="nt" style="color: #000080;">></span>Performance Estimate<span class="nt" style="color: #000080;"></div></span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-body"</span><span class="nt" style="color: #000080;">></span>I/O performance estimate (at the POSIX layer): transferred 107835432.9 MiB at 44357.76 MiB/s<span class="nt" style="color: #000080;"></div></span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="html"><span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-group"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="html"> <span class="nt" style="color: #000080;"><h4</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-title"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="html"> <span class="nt" style="color: #000080;"><a</span> <span class="na" style="color: #008080;">data-toggle=</span><span class="s" style="color: #d14;">"collapse"</span> <span class="na" style="color: #008080;">href=</span><span class="s" style="color: #d14;">"#collapse0"</span><span class="nt" style="color: #000080;">></span>Documentation<span class="nt" style="color: #000080;"></a></span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">id=</span><span class="s" style="color: #d14;">"collapse0"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-collapse collapse"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="html"> <span class="nt" style="color: #000080;"><a</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"list-group-item"</span> <span class="na" style="color: #008080;">href=</span><span class="s" style="color: #d14;">"https://www.mcs.anl.gov/research/projects/darshan/docs/darshan-util.html#_guide_to_darshan_parser_output"</span><span class="nt" style="color: #000080;">></span>Counter Documentation<span class="nt" style="color: #000080;"></a></span></span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">id=</span><span class="s" style="color: #d14;">"collapse1"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-collapse collapse in"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-body"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"row"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-6"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="html"> <span class="nt" style="color: #000080;"><img</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"img-rounded"</span> <span class="na" style="color: #008080;">alt=</span><span class="s" style="color: #d14;">"avg-io-per-proc"</span> <span class="na" style="color: #008080;">src=</span><span class="s" style="color: #d14;">"data:image/png;base64,${var.plot_io_cost}"</span><span class="nt" style="color: #000080;">/></span></span>
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-6"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="html"> <span class="nt" style="color: #000080;"><img</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"img-rounded"</span> <span class="na" style="color: #008080;">alt=</span><span class="s" style="color: #d14;">"io-counts"</span> <span class="na" style="color: #008080;">src=</span><span class="s" style="color: #d14;">"data:image/png;base64,${var.plot_op_count}"</span><span class="nt" style="color: #000080;">/></span></span>
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"row"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-6"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="html"> <span class="nt" style="color: #000080;"><h3></span>Data Transer Per Filesystem (POSIX and STDIO)<span class="nt" style="color: #000080;"></h3></span></span>
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="html"> <span class="nt" style="color: #000080;"><table</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"table"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="html"> <span class="nt" style="color: #000080;"><th</span> <span class="na" style="color: #008080;">rowspan=</span><span class="s" style="color: #d14;">"2"</span><span class="nt" style="color: #000080;">></span>File System<span class="nt" style="color: #000080;"></th></span></span>
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="html"> <span class="nt" style="color: #000080;"><th</span> <span class="na" style="color: #008080;">colspan=</span><span class="s" style="color: #d14;">"2"</span><span class="nt" style="color: #000080;">></span>Write<span class="nt" style="color: #000080;"></th></span></span>
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="html"> <span class="nt" style="color: #000080;"><th</span> <span class="na" style="color: #008080;">colspan=</span><span class="s" style="color: #d14;">"2"</span><span class="nt" style="color: #000080;">></span>Read<span class="nt" style="color: #000080;"></th></span></span>
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>MiB<span class="nt" style="color: #000080;"></th></span></span>
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Ratio<span class="nt" style="color: #000080;"></th></span></span>
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102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>MiB<span class="nt" style="color: #000080;"></th></span></span>
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Ratio<span class="nt" style="color: #000080;"></th></span></span>
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="html"> <span class="nt" style="color: #000080;"></thead></span></span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="html"> <span class="nt" style="color: #000080;"><tbody></span></span>
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="html"> <span class="nt" style="color: #000080;"><py:for</span> <span class="na" style="color: #008080;">each=</span><span class="s" style="color: #d14;">"key in var.fs_data"</span><span class="nt" style="color: #000080;">></span></span>
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108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>${key}<span class="nt" style="color: #000080;"></td></span></span>
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110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>${var.fs_data[key]['write'] / (1024*1024)}<span class="nt" style="color: #000080;"></td></span></span>
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111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>${var.fs_data[key]['write_rt']}<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>${var.fs_data[key]['read'] / (1024*1024)}<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>${var.fs_data[key]['read_rt']}<span class="nt" style="color: #000080;"></td></span></span>
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114
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="html"> <span class="nt" style="color: #000080;"></py:for></span></span>
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-6"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="html"> <span class="nt" style="color: #000080;"><h3></span>File Count Summary<span class="nt" style="color: #000080;"><br/></span>(estimated by POSIX I/O access offsets)<span class="nt" style="color: #000080;"></h3></span></span>
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121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="html"> <span class="nt" style="color: #000080;"><table</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"table"</span><span class="nt" style="color: #000080;">></span></span>
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122
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124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Type<span class="nt" style="color: #000080;"></th></span></span>
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125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Number of Files<span class="nt" style="color: #000080;"></th></span></span>
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126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Avg. Size<span class="nt" style="color: #000080;"></th></span></span>
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127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Max Size<span class="nt" style="color: #000080;"></th></span></span>
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128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="html"> <span class="nt" style="color: #000080;"></thead></span></span>
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130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="html"> <span class="nt" style="color: #000080;"><tbody></span></span>
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131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>Total Opened<span class="nt" style="color: #000080;"></td></span></span>
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133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>2838<span class="nt" style="color: #000080;"></td></span></span>
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134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>38G<span class="nt" style="color: #000080;"></td></span></span>
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135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>113G<span class="nt" style="color: #000080;"></td></span></span>
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136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>read-only files<span class="nt" style="color: #000080;"></td></span></span>
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139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>129<span class="nt" style="color: #000080;"></td></span></span>
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140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>66G<span class="nt" style="color: #000080;"></td></span></span>
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<td class="diff-line-num new new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>70G<span class="nt" style="color: #000080;"></td></span></span>
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142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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<td class="diff-line-num new new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>write-only files<span class="nt" style="color: #000080;"></td></span></span>
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<td class="diff-line-num new new_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>2451<span class="nt" style="color: #000080;"></td></span></span>
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<td class="diff-line-num new new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>34G<span class="nt" style="color: #000080;"></td></span></span>
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<td class="diff-line-num new new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>113G<span class="nt" style="color: #000080;"></td></span></span>
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148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>read/write files<span class="nt" style="color: #000080;"></td></span></span>
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151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>258<span class="nt" style="color: #000080;"></td></span></span>
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152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>67G<span class="nt" style="color: #000080;"></td></span></span>
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153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>72G<span class="nt" style="color: #000080;"></td></span></span>
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154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>created files<span class="nt" style="color: #000080;"></td></span></span>
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157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>2709<span class="nt" style="color: #000080;"></td></span></span>
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158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>37G<span class="nt" style="color: #000080;"></td></span></span>
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159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>113G<span class="nt" style="color: #000080;"></td></span></span>
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160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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161
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162
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163
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164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="html"> <span class="c" style="color: #998; font-style: italic;"><!-- </div> --></span></span>
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165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="html"> <span class="c" style="color: #998; font-style: italic;"><!-- </div> --></span></span>
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166
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167
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168
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169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="html"><span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel panel-primary"</span><span class="nt" style="color: #000080;">></span></span>
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170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-heading"</span><span class="nt" style="color: #000080;">></span></span>
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171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="html"> <span class="nt" style="color: #000080;"><h4</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-title"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="html"> <span class="nt" style="color: #000080;"><a</span> <span class="na" style="color: #008080;">data-toggle=</span><span class="s" style="color: #d14;">"collapse"</span> <span class="na" style="color: #008080;">href=</span><span class="s" style="color: #d14;">"#collapse2"</span><span class="nt" style="color: #000080;">></span>I/O Access<span class="nt" style="color: #000080;"></a></span></span>
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">id=</span><span class="s" style="color: #d14;">"collapse2"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-collapse collapse in"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="html"> <span class="nt" style="color: #000080;"><img</span> <span class="na" style="color: #008080;">src=</span><span class="s" style="color: #d14;">"plot2.png"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"img-rounded"</span> <span class="na" style="color: #008080;">alt=</span><span class="s" style="color: #d14;">"io-access"</span><span class="nt" style="color: #000080;">/></span></span>
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="html"> <span class="nt" style="color: #000080;"><figure></span></span>
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="html"> <span class="nt" style="color: #000080;"><img</span> <span class="na" style="color: #008080;">src=</span><span class="s" style="color: #d14;">"plot4.png"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"img-rounded"</span> <span class="na" style="color: #008080;">alt=</span><span class="s" style="color: #d14;">"io-count"</span><span class="nt" style="color: #000080;">/></span></span>
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="html"> <span class="nt" style="color: #000080;"><figcaption></span>sequential: An I/O op issued at an offset greter than wehre th previous I/O op ended.<span class="nt" style="color: #000080;"><br/></span></span>
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="html"> consecutive: An I/O op issued at the offset immediately following the end of the previous I/O op.</span>
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="html"> <span class="nt" style="color: #000080;"></figcaption></span></span>
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191
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"row"</span><span class="nt" style="color: #000080;">></span></span>
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192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-4"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="html"> <span class="nt" style="color: #000080;"><h3></span>Most Common Access Size<span class="nt" style="color: #000080;"><br/></span>(POSIX or MPI-IO)<span class="nt" style="color: #000080;"></h3></span></span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="html"> <span class="nt" style="color: #000080;"><table</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"table"</span><span class="nt" style="color: #000080;">></span></span>
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195
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196
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197
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198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Access Size<span class="nt" style="color: #000080;"></th></span></span>
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199
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Count<span class="nt" style="color: #000080;"></th></span></span>
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200
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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201
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202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="html"> <span class="nt" style="color: #000080;"><tbody></span></span>
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203
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204
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>POSIX<span class="nt" style="color: #000080;"></td></span></span>
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205
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>11632<span class="nt" style="color: #000080;"></td></span></span>
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206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>1536<span class="nt" style="color: #000080;"></td></span></span>
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207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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208
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></td></span></span>
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210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>153548<span class="nt" style="color: #000080;"></td></span></span>
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211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>912<span class="nt" style="color: #000080;"></td></span></span>
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212
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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213
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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214
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></td></span></span>
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215
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>135976<span class="nt" style="color: #000080;"></td></span></span>
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216
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>912<span class="nt" style="color: #000080;"></td></span></span>
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217
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>171392<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>912<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC226" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-8"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="html"> <span class="nt" style="color: #000080;"><h3></span>Average I/O per process (POSIX or MPI-IO)<span class="nt" style="color: #000080;"></h3></span></span>
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Cumulative time spent in I/O functions (seconds)<span class="nt" style="color: #000080;"></th></span></span>
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<pre style="margin: 0;">+<span id="LC233" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Amount of I/O (MB)<span class="nt" style="color: #000080;"></th></span></span>
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<pre style="margin: 0;">+<span id="LC238" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>Independent reads<span class="nt" style="color: #000080;"></td></span></span>
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239
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>1.8266612705078<span class="nt" style="color: #000080;"></td></span></span>
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240
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>266.787112236954<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC243" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>Independent writes<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC244" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>9.22240010139975<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>4121.04788513078<span class="nt" style="color: #000080;"></td></span></span>
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>Indepednent metadata<span class="nt" style="color: #000080;"></td></span></span>
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249
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>1686.44261747184<span class="nt" style="color: #000080;"></td></span></span>
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250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>N/A<span class="nt" style="color: #000080;"></td></span></span>
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251
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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252
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>Shared reads<span class="nt" style="color: #000080;"></td></span></span>
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254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>0<span class="nt" style="color: #000080;"></td></span></span>
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255
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>0<span class="nt" style="color: #000080;"></td></span></span>
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256
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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257
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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258
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>Shared writes<span class="nt" style="color: #000080;"></td></span></span>
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259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>0<span class="nt" style="color: #000080;"></td></span></span>
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260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>0<span class="nt" style="color: #000080;"></td></span></span>
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261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="html"> <span class="nt" style="color: #000080;"><tr></span></span>
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263
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>Shared metadata<span class="nt" style="color: #000080;"></td></span></span>
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264
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<pre style="margin: 0;">+<span id="LC264" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>0<span class="nt" style="color: #000080;"></td></span></span>
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265
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>N/A<span class="nt" style="color: #000080;"></td></span></span>
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266
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="html"> <span class="nt" style="color: #000080;"></tr></span></span>
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274
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275
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="html"><span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel panel-primary"</span><span class="nt" style="color: #000080;">></span></span>
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276
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<pre style="margin: 0;">+<span id="LC276" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-heading"</span><span class="nt" style="color: #000080;">></span></span>
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277
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<pre style="margin: 0;">+<span id="LC277" class="line" lang="html"> <span class="nt" style="color: #000080;"><h4</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-title"</span><span class="nt" style="color: #000080;">></span></span>
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278
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<pre style="margin: 0;">+<span id="LC278" class="line" lang="html"> <span class="nt" style="color: #000080;"><a</span> <span class="na" style="color: #008080;">data-toggle=</span><span class="s" style="color: #d14;">"collapse"</span> <span class="na" style="color: #008080;">href=</span><span class="s" style="color: #d14;">"#collapse3"</span><span class="nt" style="color: #000080;">></span>I/O Timeline<span class="nt" style="color: #000080;"></a></span></span>
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279
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="html"> <span class="nt" style="color: #000080;"></h4></span></span>
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280
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281
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<pre style="margin: 0;">+<span id="LC281" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">id=</span><span class="s" style="color: #d14;">"collapse3"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-collapse collapse in"</span><span class="nt" style="color: #000080;">></span></span>
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282
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<pre style="margin: 0;">+<span id="LC282" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-body"</span><span class="nt" style="color: #000080;">></span></span>
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283
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<pre style="margin: 0;">+<span id="LC283" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"container"</span><span class="nt" style="color: #000080;">></span></span>
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284
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<pre style="margin: 0;">+<span id="LC284" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"row"</span><span class="nt" style="color: #000080;">></span></span>
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285
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<pre style="margin: 0;">+<span id="LC285" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-6"</span><span class="nt" style="color: #000080;">></span></span>
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286
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<pre style="margin: 0;">+<span id="LC286" class="line" lang="html"> <span class="nt" style="color: #000080;"><img</span> <span class="na" style="color: #008080;">src=</span><span class="s" style="color: #d14;">"plot5.png"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"img-rounded"</span> <span class="na" style="color: #008080;">alt=</span><span class="s" style="color: #d14;">"read-timeline"</span><span class="nt" style="color: #000080;">/></span></span>
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287
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288
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289
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<pre style="margin: 0;">+<span id="LC289" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"row"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC291" class="line" lang="html"> <span class="nt" style="color: #000080;"><img</span> <span class="na" style="color: #008080;">src=</span><span class="s" style="color: #d14;">"plot6.png"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"img-rounded"</span> <span class="na" style="color: #008080;">alt=</span><span class="s" style="color: #d14;">"write-timeline"</span><span class="nt" style="color: #000080;">/></span></span>
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<pre style="margin: 0;">+<span id="LC296" class="line" lang="html"> <span class="nt" style="color: #000080;"><img</span> <span class="na" style="color: #008080;">src=</span><span class="s" style="color: #d14;">"plot7.png"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"img-rounded"</span> <span class="na" style="color: #008080;">alt=</span><span class="s" style="color: #d14;">"shared-timeline"</span><span class="nt" style="color: #000080;">/></span></span>
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<pre style="margin: 0;">+<span id="LC306" class="line" lang="html"> <span class="nt" style="color: #000080;"><a</span> <span class="na" style="color: #008080;">data-toggle=</span><span class="s" style="color: #d14;">"collapse"</span> <span class="na" style="color: #008080;">href=</span><span class="s" style="color: #d14;">"#collapse4"</span><span class="nt" style="color: #000080;">></span>I/O Variance<span class="nt" style="color: #000080;"></a></span></span>
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<pre style="margin: 0;">+<span id="LC309" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">id=</span><span class="s" style="color: #d14;">"collapse4"</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"panel-collapse collapse in"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC312" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"row"</span><span class="nt" style="color: #000080;">></span></span>
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313
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<pre style="margin: 0;">+<span id="LC313" class="line" lang="html"> <span class="nt" style="color: #000080;"><div</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"col-lg-12"</span><span class="nt" style="color: #000080;">></span></span>
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<pre style="margin: 0;">+<span id="LC314" class="line" lang="html"> <span class="nt" style="color: #000080;"><h3></span>Variance in Shared File (POSIX and STDIO)<span class="nt" style="color: #000080;"></h3></span></span>
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315
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<pre style="margin: 0;">+<span id="LC315" class="line" lang="html"> <span class="nt" style="color: #000080;"><table</span> <span class="na" style="color: #008080;">class=</span><span class="s" style="color: #d14;">"table"</span><span class="nt" style="color: #000080;">></span></span>
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316
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317
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318
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<pre style="margin: 0;">+<span id="LC318" class="line" lang="html"> <span class="nt" style="color: #000080;"><th</span> <span class="na" style="color: #008080;">rowspan=</span><span class="s" style="color: #d14;">"2"</span><span class="nt" style="color: #000080;">></span>File Suffix<span class="nt" style="color: #000080;"></th></span></span>
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319
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<pre style="margin: 0;">+<span id="LC319" class="line" lang="html"> <span class="nt" style="color: #000080;"><th</span> <span class="na" style="color: #008080;">rowspan=</span><span class="s" style="color: #d14;">"2"</span><span class="nt" style="color: #000080;">></span>Processes<span class="nt" style="color: #000080;"></th></span></span>
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320
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<pre style="margin: 0;">+<span id="LC320" class="line" lang="html"> <span class="nt" style="color: #000080;"><th</span> <span class="na" style="color: #008080;">colspan=</span><span class="s" style="color: #d14;">"3"</span><span class="nt" style="color: #000080;">></span>Fastest<span class="nt" style="color: #000080;"></th></span></span>
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321
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<pre style="margin: 0;">+<span id="LC321" class="line" lang="html"> <span class="nt" style="color: #000080;"><th</span> <span class="na" style="color: #008080;">colspan=</span><span class="s" style="color: #d14;">"3"</span><span class="nt" style="color: #000080;">></span>Slowest<span class="nt" style="color: #000080;"></th></span></span>
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322
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<pre style="margin: 0;">+<span id="LC322" class="line" lang="html"> <span class="nt" style="color: #000080;"><th</span> <span class="na" style="color: #008080;">colspan=</span><span class="s" style="color: #d14;">"2"</span><span class="nt" style="color: #000080;">></span><span class="ni" style="color: #800080;">σ</span><span class="nt" style="color: #000080;"></th></span></span>
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323
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325
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<pre style="margin: 0;">+<span id="LC325" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Rank<span class="nt" style="color: #000080;"></th></span></span>
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326
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<pre style="margin: 0;">+<span id="LC326" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Time<span class="nt" style="color: #000080;"></th></span></span>
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327
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<pre style="margin: 0;">+<span id="LC327" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Bytes<span class="nt" style="color: #000080;"></th></span></span>
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328
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<pre style="margin: 0;">+<span id="LC328" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Rank<span class="nt" style="color: #000080;"></th></span></span>
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329
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<pre style="margin: 0;">+<span id="LC329" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Time<span class="nt" style="color: #000080;"></th></span></span>
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330
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<pre style="margin: 0;">+<span id="LC330" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Bytes<span class="nt" style="color: #000080;"></th></span></span>
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331
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<pre style="margin: 0;">+<span id="LC331" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Time<span class="nt" style="color: #000080;"></th></span></span>
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332
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<pre style="margin: 0;">+<span id="LC332" class="line" lang="html"> <span class="nt" style="color: #000080;"><th></span>Bytes<span class="nt" style="color: #000080;"></th></span></span>
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333
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334
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<pre style="margin: 0;">+<span id="LC337" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>blah.txt<span class="nt" style="color: #000080;"></td></span></span>
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338
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<pre style="margin: 0;">+<span id="LC338" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>100<span class="nt" style="color: #000080;"></td></span></span>
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339
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<pre style="margin: 0;">+<span id="LC339" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>1<span class="nt" style="color: #000080;"></td></span></span>
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340
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<pre style="margin: 0;">+<span id="LC340" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>2<span class="nt" style="color: #000080;"></td></span></span>
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341
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<pre style="margin: 0;">+<span id="LC341" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>3<span class="nt" style="color: #000080;"></td></span></span>
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342
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<pre style="margin: 0;">+<span id="LC342" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>0<span class="nt" style="color: #000080;"></td></span></span>
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343
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<pre style="margin: 0;">+<span id="LC343" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>4<span class="nt" style="color: #000080;"></td></span></span>
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344
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<pre style="margin: 0;">+<span id="LC344" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>5<span class="nt" style="color: #000080;"></td></span></span>
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345
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<pre style="margin: 0;">+<span id="LC345" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>6<span class="nt" style="color: #000080;"></td></span></span>
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346
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<pre style="margin: 0;">+<span id="LC346" class="line" lang="html"> <span class="nt" style="color: #000080;"><td></span>7<span class="nt" style="color: #000080;"></td></span></span>
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