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<h3>
Shane Snyder pushed to branch master
at <a href="https://xgitlab.cels.anl.gov/darshan/darshan">darshan / darshan</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/cfda2264af467439b639cb3d78e02cdb497f815d">cfda2264</a></strong>
<div>
<span>by Shane Snyder</span>
<i>at 2021-03-25T21:48:40-05:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add H5D module counter to indicate corresponding H5F record ID
</pre>
</li>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/631305946cbda0d1a1c6dd0178fb01b7f94095be">63130594</a></strong>
<div>
<span>by Shane Snyder</span>
<i>at 2021-03-25T21:48:40-05:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge branch 'dev-h5d-file-rec-counter' into 'master'
Add H5D module counter to indicate corresponding H5F record ID
See merge request darshan/darshan!91</pre>
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<h4>4 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#ce35bd04c4558598783b7b3b44035e98e07a7b46">
darshan-hdf5-log-format.h
</a>
</li>
<li class="file-stats">
<a href="#8db652116ee33e5969aa0dc28d53c50c7fe13a3b">
darshan-runtime/lib/darshan-hdf5.c
</a>
</li>
<li class="file-stats">
<a href="#767555317036ed1bce94879712f2cb668969978f">
darshan-util/darshan-hdf5-logutils.c
</a>
</li>
<li class="file-stats">
<a href="#675dfa95533a19d025bb2d9c3c64df4eb14fedc5">
darshan-util/pydarshan/darshan/backend/api_def_c.py
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<h4>Changes:</h4>
<li id="ce35bd04c4558598783b7b3b44035e98e07a7b46">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/compare/054de6708ac8ff0ea3b6f994dae6b6c0fe89a5ce...631305946cbda0d1a1c6dd0178fb01b7f94095be#ce35bd04c4558598783b7b3b44035e98e07a7b46"><strong>darshan-hdf5-log-format.h</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -9,7 +9,7 @@</td>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="c"></span>
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<td class="diff-line-num old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="c"><span class="cm" style="color: #998; font-style: italic;">/* current HDF5 log format versions */</span></span>
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<td class="diff-line-num old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define DARSHAN_H5F_VER 3</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define DARSHAN_H5D_VER <span class="idiff left right">1</span></span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define DARSHAN_H5D_VER <span class="idiff left right">2</span></span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="c"></span>
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<td class="diff-line-num old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define H5D_MAX_NDIMS 5</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="c"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -245,6 +245,7 @@ struct darshan_hdf5_file</td>
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<pre style="margin: 0;"> <span id="LC245" class="line" lang="c"><span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">darshan_hdf5_dataset</span></span>
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<td class="diff-line-num old_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC246" class="line" lang="c"><span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC247" class="line" lang="c"> <span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">darshan_base_record</span> <span class="n" style="color: #333;">base_rec</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">uint64_t</span> <span class="n" style="color: #333;">file_rec_id</span><span class="p">;</span></span>
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<td class="diff-line-num new_line" data-linenumber="249" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC249" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">int64_t</span> <span class="n" style="color: #333;">counters</span><span class="p">[</span><span class="n" style="color: #333;">H5D_NUM_INDICES</span><span class="p">];</span></span>
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<pre style="margin: 0;"> <span id="LC250" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">double</span> <span class="n" style="color: #333;">fcounters</span><span class="p">[</span><span class="n" style="color: #333;">H5D_F_NUM_INDICES</span><span class="p">];</span></span>
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<pre style="margin: 0;"> <span id="LC251" class="line" lang="c"><span class="p">};</span></span>
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<li id="8db652116ee33e5969aa0dc28d53c50c7fe13a3b">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/compare/054de6708ac8ff0ea3b6f994dae6b6c0fe89a5ce...631305946cbda0d1a1c6dd0178fb01b7f94095be#8db652116ee33e5969aa0dc28d53c50c7fe13a3b"><strong>darshan-runtime/lib/darshan-hdf5.c</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -410,7 +410,7 @@ herr_t DARSHAN_DECL(H5Fclose)(hid_t file_id)</td>
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<pre style="margin: 0;"> <span id="LC410" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> char *__file_path, *__tmp_ptr; \</span></span>
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<pre style="margin: 0;"> <span id="LC411" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> char __rec_name[DARSHAN_HDF5_MAX_NAME_LEN] = {0}; \</span></span>
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<pre style="margin: 0;"> <span id="LC412" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> ssize_t __req_name_len = DARSHAN_HDF5_MAX_NAME_LEN-1, __ret_name_len; \</span></span>
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413
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<pre style="margin: 0;">-<span id="LC413" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> darshan_record_id __rec_id; \</span></span>
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<pre style="margin: 0;">+<span id="LC413" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> darshan_record_id __rec_id<span class="idiff left right">, __file_rec_id = 0</span>; \</span></span>
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414
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<pre style="margin: 0;"> <span id="LC414" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> struct hdf5_dataset_record_ref *__rec_ref; \</span></span>
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415
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<pre style="margin: 0;"> <span id="LC415" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> hsize_t __chunk_dims[H5D_MAX_NDIMS] = {0}; \</span></span>
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416
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<pre style="margin: 0;"> <span id="LC416" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> int __i, __n_chunk_dims = 0; \</span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="424" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -424,6 +424,7 @@ herr_t DARSHAN_DECL(H5Fclose)(hid_t file_id)</td>
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424
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424
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<pre style="margin: 0;"> <span id="LC424" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> free(__file_path); \</span></span>
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425
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425
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<pre style="margin: 0;"> <span id="LC425" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> break; \</span></span>
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426
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<pre style="margin: 0;"> <span id="LC426" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> } \</span></span>
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<pre style="margin: 0;">+<span id="LC427" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> __file_rec_id = darshan_core_gen_record_id(__file_path); \</span></span>
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427
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428
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<pre style="margin: 0;"> <span id="LC428" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> strncpy(__rec_name, __file_path, __req_name_len); \</span></span>
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428
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429
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<pre style="margin: 0;"> <span id="LC429" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> free(__file_path); \</span></span>
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<pre style="margin: 0;"> <span id="LC430" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> if(strlen(__rec_name) + 2 <= __req_name_len) { \</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -462,6 +463,7 @@ herr_t DARSHAN_DECL(H5Fclose)(hid_t file_id)</td>
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462
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463
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<pre style="margin: 0;"> <span id="LC463" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> __rec_ref->dataset_rec->counters[H5D_CHUNK_SIZE_D1 + __i] = __chunk_dims[__n_chunk_dims - __i - 1]; \</span></span>
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463
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464
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<pre style="margin: 0;"> <span id="LC464" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> } \</span></span>
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464
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465
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<pre style="margin: 0;"> <span id="LC465" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> __rec_ref->dataset_rec->counters[H5D_DATATYPE_SIZE] = H5Tget_size(__type_id); \</span></span>
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<pre style="margin: 0;">+<span id="LC466" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> __rec_ref->dataset_rec->file_rec_id = __file_rec_id; \</span></span>
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465
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467
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<pre style="margin: 0;"> <span id="LC467" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> darshan_add_record_ref(&(hdf5_dataset_runtime->hid_hash), &__ret, sizeof(hid_t), __rec_ref); \</span></span>
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<pre style="margin: 0;"> <span id="LC468" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">} while(0)</span></span>
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467
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469
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<pre style="margin: 0;"> <span id="LC469" class="line" lang="c"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="1177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -1177,6 +1179,7 @@ static void hdf5_dataset_record_reduction_op(void* inrec_v, void* inoutrec_v,</td>
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1177
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1179
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<pre style="margin: 0;"> <span id="LC1179" class="line" lang="c"> <span class="n" style="color: #333;">memset</span><span class="p">(</span><span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">tmp_dataset</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">darshan_hdf5_dataset</span><span class="p">));</span></span>
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1178
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1180
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<pre style="margin: 0;"> <span id="LC1180" class="line" lang="c"> <span class="n" style="color: #333;">tmp_dataset</span><span class="p">.</span><span class="n" style="color: #333;">base_rec</span><span class="p">.</span><span class="n" style="color: #333;">id</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">inrec</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">base_rec</span><span class="p">.</span><span class="n" style="color: #333;">id</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC1181" class="line" lang="c"> <span class="n" style="color: #333;">tmp_dataset</span><span class="p">.</span><span class="n" style="color: #333;">base_rec</span><span class="p">.</span><span class="n" style="color: #333;">rank</span> <span class="o" style="font-weight: 600;">=</span> <span class="o" style="font-weight: 600;">-</span><span class="mi" style="color: #099;">1</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC1182" class="line" lang="c"> <span class="n" style="color: #333;">tmp_dataset</span><span class="p">.</span><span class="n" style="color: #333;">file_rec_id</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">inrec</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">file_rec_id</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC1183" class="line" lang="c"></span>
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<pre style="margin: 0;"> <span id="LC1184" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* sum */</span></span>
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<pre style="margin: 0;"> <span id="LC1185" class="line" lang="c"> <span class="k" style="font-weight: 600;">for</span><span class="p">(</span><span class="n" style="color: #333;">j</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">H5D_OPENS</span><span class="p">;</span> <span class="n" style="color: #333;">j</span><span class="o" style="font-weight: 600;"><=</span><span class="n" style="color: #333;">H5D_POINT_SELECTS</span><span class="p">;</span> <span class="n" style="color: #333;">j</span><span class="o" style="font-weight: 600;">++</span><span class="p">)</span></span>
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<li id="767555317036ed1bce94879712f2cb668969978f">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/compare/054de6708ac8ff0ea3b6f994dae6b6c0fe89a5ce...631305946cbda0d1a1c6dd0178fb01b7f94095be#767555317036ed1bce94879712f2cb668969978f"><strong>darshan-util/darshan-hdf5-logutils.c</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -39,6 +39,8 @@ char *h5d_f_counter_names[] = {</td>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define DARSHAN_H5F_FILE_SIZE_1 40</span></span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define DARSHAN_H5F_FILE_SIZE_2 56</span></span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="c"></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define DARSHAN_H5D_DATASET_SIZE_1 904</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="c"></span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="c"><span class="k" style="font-weight: 600;">static</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="nf" style="color: #900; font-weight: 600;">darshan_log_get_hdf5_file</span><span class="p">(</span><span class="n" style="color: #333;">darshan_fd</span> <span class="n" style="color: #333;">fd</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">void</span><span class="o" style="font-weight: 600;">**</span> <span class="n" style="color: #333;">hdf5_buf_p</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="c"><span class="k" style="font-weight: 600;">static</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="nf" style="color: #900; font-weight: 600;">darshan_log_put_hdf5_file</span><span class="p">(</span><span class="n" style="color: #333;">darshan_fd</span> <span class="n" style="color: #333;">fd</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">void</span><span class="o" style="font-weight: 600;">*</span> <span class="n" style="color: #333;">hdf5_buf</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="c"><span class="k" style="font-weight: 600;">static</span> <span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="nf" style="color: #900; font-weight: 600;">darshan_log_print_hdf5_file</span><span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">void</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">ds_rec</span><span class="p">,</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -246,6 +248,30 @@ static int darshan_log_get_hdf5_dataset(darshan_fd fd, void** hdf5_buf_p)</td>
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<pre style="margin: 0;"> <span id="LC248" class="line" lang="c"> <span class="n" style="color: #333;">rec_len</span> <span class="o" style="font-weight: 600;">=</span> <span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">darshan_hdf5_dataset</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC249" class="line" lang="c"> <span class="n" style="color: #333;">ret</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">darshan_log_get_mod</span><span class="p">(</span><span class="n" style="color: #333;">fd</span><span class="p">,</span> <span class="n" style="color: #333;">DARSHAN_H5D_MOD</span><span class="p">,</span> <span class="n" style="color: #333;">ds</span><span class="p">,</span> <span class="n" style="color: #333;">rec_len</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC250" class="line" lang="c"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="c"> <span class="k" style="font-weight: 600;">else</span></span>
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="c"> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="n" style="color: #333;">scratch</span><span class="p">[</span><span class="mi" style="color: #099;">1024</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="mi" style="color: #099;">0</span><span class="p">};</span></span>
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<td class="diff-line-num new new_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">src_p</span><span class="p">,</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">dest_p</span><span class="p">;</span></span>
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255
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">len</span><span class="p">;</span></span>
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256
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="c"></span>
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<td class="diff-line-num new new_line" data-linenumber="257" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
257
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">fd</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">mod_ver</span><span class="p">[</span><span class="n" style="color: #333;">DARSHAN_H5D_MOD</span><span class="p">]</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">1</span><span class="p">)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="258" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
258
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="c"> <span class="p">{</span></span>
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<td class="diff-line-num new new_line" data-linenumber="259" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="c"> <span class="n" style="color: #333;">rec_len</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">DARSHAN_H5D_DATASET_SIZE_1</span><span class="p">;</span></span>
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<td class="diff-line-num new new_line" data-linenumber="260" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="c"> <span class="n" style="color: #333;">ret</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">darshan_log_get_mod</span><span class="p">(</span><span class="n" style="color: #333;">fd</span><span class="p">,</span> <span class="n" style="color: #333;">DARSHAN_H5D_MOD</span><span class="p">,</span> <span class="n" style="color: #333;">scratch</span><span class="p">,</span> <span class="n" style="color: #333;">rec_len</span><span class="p">);</span></span>
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<td class="diff-line-num new new_line" data-linenumber="261" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">ret</span> <span class="o" style="font-weight: 600;">!=</span> <span class="n" style="color: #333;">rec_len</span><span class="p">)</span></span>
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262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="c"> <span class="k" style="font-weight: 600;">goto</span> <span class="n" style="color: #333;">exit</span><span class="p">;</span></span>
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263
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="c"></span>
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264
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<pre style="margin: 0;">+<span id="LC264" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* upconvert version 1 to version 2 in-place */</span></span>
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265
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="c"> <span class="n" style="color: #333;">dest_p</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">scratch</span> <span class="o" style="font-weight: 600;">+</span> <span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">darshan_base_record</span><span class="p">)</span> <span class="o" style="font-weight: 600;">+</span> <span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">uint64_t</span><span class="p">);</span></span>
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266
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="c"> <span class="n" style="color: #333;">src_p</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">dest_p</span> <span class="o" style="font-weight: 600;">-</span> <span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">uint64_t</span><span class="p">);</span></span>
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<td class="diff-line-num new new_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
267
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="c"> <span class="n" style="color: #333;">len</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">DARSHAN_H5D_DATASET_SIZE_1</span> <span class="o" style="font-weight: 600;">-</span> <span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">darshan_base_record</span><span class="p">);</span></span>
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<td class="diff-line-num new new_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
268
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<pre style="margin: 0;">+<span id="LC268" class="line" lang="c"> <span class="n" style="color: #333;">memmove</span><span class="p">(</span><span class="n" style="color: #333;">dest_p</span><span class="p">,</span> <span class="n" style="color: #333;">src_p</span><span class="p">,</span> <span class="n" style="color: #333;">len</span><span class="p">);</span></span>
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269
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<pre style="margin: 0;">+<span id="LC269" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* set FILE_REC_ID to 0 */</span></span>
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270
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<pre style="margin: 0;">+<span id="LC270" class="line" lang="c"> <span class="o" style="font-weight: 600;">*</span><span class="p">((</span><span class="kt" style="color: #458; font-weight: 600;">uint64_t</span> <span class="o" style="font-weight: 600;">*</span><span class="p">)</span><span class="n" style="color: #333;">src_p</span><span class="p">)</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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271
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="c"> <span class="p">}</span></span>
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272
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<pre style="margin: 0;">+<span id="LC272" class="line" lang="c"></span>
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273
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="c"> <span class="n" style="color: #333;">memcpy</span><span class="p">(</span><span class="n" style="color: #333;">ds</span><span class="p">,</span> <span class="n" style="color: #333;">scratch</span><span class="p">,</span> <span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">darshan_hdf5_dataset</span><span class="p">));</span></span>
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274
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="c"> <span class="p">}</span></span>
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249
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275
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<pre style="margin: 0;"> <span id="LC275" class="line" lang="c"></span>
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250
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276
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<pre style="margin: 0;"> <span id="LC276" class="line" lang="c"><span class="nl">exit:</span></span>
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251
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277
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<pre style="margin: 0;"> <span id="LC277" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">hdf5_buf_p</span> <span class="o" style="font-weight: 600;">==</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">)</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -267,6 +293,11 @@ exit:</td>
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267
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293
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<pre style="margin: 0;"> <span id="LC293" class="line" lang="c"> <span class="p">{</span></span>
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268
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294
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<pre style="margin: 0;"> <span id="LC294" class="line" lang="c"> <span class="n" style="color: #333;">DARSHAN_BSWAP64</span><span class="p">(</span><span class="o" style="font-weight: 600;">&</span><span class="p">(</span><span class="n" style="color: #333;">ds</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">base_rec</span><span class="p">.</span><span class="n" style="color: #333;">id</span><span class="p">));</span></span>
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269
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295
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="c"> <span class="n" style="color: #333;">DARSHAN_BSWAP64</span><span class="p">(</span><span class="o" style="font-weight: 600;">&</span><span class="p">(</span><span class="n" style="color: #333;">ds</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">base_rec</span><span class="p">.</span><span class="n" style="color: #333;">rank</span><span class="p">));</span></span>
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296
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<pre style="margin: 0;">+<span id="LC296" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* skip counters we explicitly set to 0 since they don't</span></span>
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297
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<pre style="margin: 0;">+<span id="LC297" class="line" lang="c"><span class="cm" style="color: #998; font-style: italic;"> * need to be byte swapped</span></span>
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298
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<pre style="margin: 0;">+<span id="LC298" class="line" lang="c"><span class="cm" style="color: #998; font-style: italic;"> */</span></span>
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299
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<pre style="margin: 0;">+<span id="LC299" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">fd</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">mod_ver</span><span class="p">[</span><span class="n" style="color: #333;">DARSHAN_H5F_MOD</span><span class="p">]</span> <span class="o" style="font-weight: 600;">>=</span> <span class="mi" style="color: #099;">2</span><span class="p">)</span></span>
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300
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<pre style="margin: 0;">+<span id="LC300" class="line" lang="c"> <span class="n" style="color: #333;">DARSHAN_BSWAP64</span><span class="p">(</span><span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">ds</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">file_rec_id</span><span class="p">);</span></span>
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270
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301
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<pre style="margin: 0;"> <span id="LC301" class="line" lang="c"> <span class="k" style="font-weight: 600;">for</span><span class="p">(</span><span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">;</span> <span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">H5D_NUM_INDICES</span><span class="p">;</span> <span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;">++</span><span class="p">)</span></span>
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271
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302
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<pre style="margin: 0;"> <span id="LC302" class="line" lang="c"> <span class="n" style="color: #333;">DARSHAN_BSWAP64</span><span class="p">(</span><span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">ds</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">counters</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]);</span></span>
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272
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303
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<pre style="margin: 0;"> <span id="LC303" class="line" lang="c"> <span class="k" style="font-weight: 600;">for</span><span class="p">(</span><span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">;</span> <span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">H5D_F_NUM_INDICES</span><span class="p">;</span> <span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;">++</span><span class="p">)</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="352" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="383" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -352,6 +383,11 @@ static void darshan_log_print_hdf5_dataset(void *ds_rec, char *ds_name,</td>
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352
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383
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<pre style="margin: 0;"> <span id="LC383" class="line" lang="c"> <span class="n" style="color: #333;">ds_name</span><span class="p">,</span> <span class="n" style="color: #333;">mnt_pt</span><span class="p">,</span> <span class="n" style="color: #333;">fs_type</span><span class="p">);</span></span>
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353
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384
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<pre style="margin: 0;"> <span id="LC384" class="line" lang="c"> <span class="p">}</span></span>
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354
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385
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<pre style="margin: 0;"> <span id="LC385" class="line" lang="c"></span>
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386
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<pre style="margin: 0;">+<span id="LC386" class="line" lang="c"> <span class="n" style="color: #333;">DARSHAN_U_COUNTER_PRINT</span><span class="p">(</span><span class="n" style="color: #333;">darshan_module_names</span><span class="p">[</span><span class="n" style="color: #333;">DARSHAN_H5D_MOD</span><span class="p">],</span></span>
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387
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<pre style="margin: 0;">+<span id="LC387" class="line" lang="c"> <span class="n" style="color: #333;">hdf5_ds_rec</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">base_rec</span><span class="p">.</span><span class="n" style="color: #333;">rank</span><span class="p">,</span> <span class="n" style="color: #333;">hdf5_ds_rec</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">base_rec</span><span class="p">.</span><span class="n" style="color: #333;">id</span><span class="p">,</span></span>
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388
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<pre style="margin: 0;">+<span id="LC388" class="line" lang="c"> <span class="s" style="color: #d14;">"H5D_FILE_REC_ID"</span><span class="p">,</span> <span class="n" style="color: #333;">hdf5_ds_rec</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">file_rec_id</span><span class="p">,</span></span>
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389
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<pre style="margin: 0;">+<span id="LC389" class="line" lang="c"> <span class="n" style="color: #333;">ds_name</span><span class="p">,</span> <span class="n" style="color: #333;">mnt_pt</span><span class="p">,</span> <span class="n" style="color: #333;">fs_type</span><span class="p">);</span></span>
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390
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<pre style="margin: 0;">+<span id="LC390" class="line" lang="c"></span>
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355
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391
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<pre style="margin: 0;"> <span id="LC391" class="line" lang="c"> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span></span>
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356
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392
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<pre style="margin: 0;"> <span id="LC392" class="line" lang="c"><span class="p">}</span></span>
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357
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393
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<pre style="margin: 0;"> <span id="LC393" class="line" lang="c"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -410,6 +446,13 @@ static void darshan_log_print_hdf5_dataset_description(int ver)</td>
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410
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446
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<pre style="margin: 0;"> <span id="LC446" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"# H5D_F_MAX_*_TIME: duration of the slowest H5D read and write operations.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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411
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447
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<pre style="margin: 0;"> <span id="LC447" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"# H5D_F_*_RANK_TIME: fastest and slowest I/O time for a single rank (for shared datasets).</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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412
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448
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<pre style="margin: 0;"> <span id="LC448" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"# H5D_F_VARIANCE_RANK_*: variance of total I/O time and bytes moved for all ranks (for shared datasets).</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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449
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<pre style="margin: 0;">+<span id="LC449" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"# H5D_FILE_REC_ID: Darshan record ID corresponding to the dataset.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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450
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<pre style="margin: 0;">+<span id="LC450" class="line" lang="c"></span>
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451
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<pre style="margin: 0;">+<span id="LC451" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">ver</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">1</span><span class="p">)</span></span>
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452
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<pre style="margin: 0;">+<span id="LC452" class="line" lang="c"> <span class="p">{</span></span>
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453
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<pre style="margin: 0;">+<span id="LC453" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># WARNING: H5D module log format version 1 does not support the following counters:</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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454
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<pre style="margin: 0;">+<span id="LC454" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"# - H5D_FILE_REC_ID</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC455" class="line" lang="c"> <span class="p">}</span></span>
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456
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<pre style="margin: 0;"> <span id="LC456" class="line" lang="c"></span>
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414
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457
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<pre style="margin: 0;"> <span id="LC457" class="line" lang="c"> <span class="k" style="font-weight: 600;">return</span><span class="p">;</span></span>
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458
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<pre style="margin: 0;"> <span id="LC458" class="line" lang="c"><span class="p">}</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="646" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -646,6 +689,7 @@ static void darshan_log_agg_hdf5_datasets(void *rec, void *agg_rec, int init_fla</td>
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646
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<pre style="margin: 0;"> <span id="LC689" class="line" lang="c"> <span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">var_t</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">var_bytes_p</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">(</span><span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">var_t</span> <span class="o" style="font-weight: 600;">*</span><span class="p">)</span></span>
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647
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690
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<pre style="margin: 0;"> <span id="LC690" class="line" lang="c"> <span class="p">((</span><span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="p">)</span><span class="n" style="color: #333;">var_time_p</span> <span class="o" style="font-weight: 600;">+</span> <span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">var_t</span><span class="p">));</span></span>
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648
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691
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<pre style="margin: 0;"> <span id="LC691" class="line" lang="c"></span>
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692
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<pre style="margin: 0;">+<span id="LC692" class="line" lang="c"> <span class="n" style="color: #333;">agg_hdf5_rec</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">file_rec_id</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">hdf5_rec</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">file_rec_id</span><span class="p">;</span></span>
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649
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693
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<pre style="margin: 0;"> <span id="LC693" class="line" lang="c"> <span class="k" style="font-weight: 600;">for</span><span class="p">(</span><span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span> <span class="n" style="color: #333;">i</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">H5D_NUM_INDICES</span><span class="p">;</span> <span class="n" style="color: #333;">i</span><span class="o" style="font-weight: 600;">++</span><span class="p">)</span></span>
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650
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694
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<pre style="margin: 0;"> <span id="LC694" class="line" lang="c"> <span class="p">{</span></span>
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651
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695
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<pre style="margin: 0;"> <span id="LC695" class="line" lang="c"> <span class="k" style="font-weight: 600;">switch</span><span class="p">(</span><span class="n" style="color: #333;">i</span><span class="p">)</span></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/compare/054de6708ac8ff0ea3b6f994dae6b6c0fe89a5ce...631305946cbda0d1a1c6dd0178fb01b7f94095be#675dfa95533a19d025bb2d9c3c64df4eb14fedc5"><strong>darshan-util/pydarshan/darshan/backend/api_def_c.py</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="78" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -78,6 +78,7 @@ struct darshan_hdf5_file</td>
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78
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78
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="python"><span class="s" style="color: #d14;">struct darshan_hdf5_dataset</span></span>
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79
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79
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="python"><span class="s" style="color: #d14;">{</span></span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="python"><span class="s" style="color: #d14;"> struct darshan_base_record base_rec;</span></span>
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81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="python"><span class="s" style="color: #d14;"> uint64_t file_rec_id;</span></span>
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81
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82
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="python"><span class="s" style="color: #d14;"> int64_t counters[94];</span></span>
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82
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83
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="python"><span class="s" style="color: #d14;"> double fcounters[17];</span></span>
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83
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84
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="python"><span class="s" style="color: #d14;">};</span></span>
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