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<h3>
Philip Carns pushed to branch carns/issue-284-incomplete-warning
at <a href="https://xgitlab.cels.anl.gov/darshan/darshan">darshan / darshan</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/ff9791e3e7adfc95896b237155d9a43da4d63808">ff9791e3</a></strong>
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<span>by Phil Carns</span>
<i>at 2021-03-15T17:06:05-04:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">improve handling of incomplete logs
- exit with error by default in parsers
- show more verbose error message with tips to help
- add --show-incomplete option to enable previous behavior
</pre>
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<h4>5 changed files:</h4>
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<li class="file-stats">
<a href="#00fe7828d56d7a3ee4030d6cea057cf13f50e70c">
ChangeLog
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<li class="file-stats">
<a href="#572df96dad14228974ee7d53d7790df9c8f113f7">
darshan-util/darshan-dxt-parser.c
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<li class="file-stats">
<a href="#8f5ddb6450af14a90ba411fa534122256b3aea08">
darshan-util/darshan-job-summary/bin/darshan-job-summary.pl.in
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<li class="file-stats">
<a href="#e464f224521a25913828715e485170d093715db6">
darshan-util/darshan-job-summary/share/summary.tex
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<li class="file-stats">
<a href="#5c9b340a45c83d9810991e129cd21ae08663409d">
darshan-util/darshan-parser.c
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<h4>Changes:</h4>
<li id="00fe7828d56d7a3ee4030d6cea057cf13f50e70c">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/ff9791e3e7adfc95896b237155d9a43da4d63808#00fe7828d56d7a3ee4030d6cea057cf13f50e70c"><strong>ChangeLog</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2,10 +2,12 @@</td>
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Darshan Release Change Log</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">--------------------------</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext">Darshan-3.<span class="idiff left right">2.2</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">Darshan-3.<span class="idiff left right">3</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">=============</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">* add wrappers for preadv, preadv2, pwritev, and pwritev2 (improves profiling</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> of ompio)</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext">* improve error handling in command line parsers to make incomplete logs more</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> obvious to users</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">Darshan-3.2.1</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext">=============</span>
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<li id="572df96dad14228974ee7d53d7790df9c8f113f7">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/ff9791e3e7adfc95896b237155d9a43da4d63808#572df96dad14228974ee7d53d7790df9c8f113f7"><strong>darshan-util/darshan-dxt-parser.c</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -20,15 +20,14 @@</td>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="c"></span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#include "darshan-logutils.h"</span></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="c"></span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="c"><span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="nf" style="color: #900; font-weight: 600;">usage</span> <span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">exename</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="c"><span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span> <span class="s" style="color: #d14;">"Usage: %s <filename></span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">,</span> <span class="n" style="color: #333;">exename</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define OPTION_SHOW_INCOMPLETE (1 << 7) </span><span class="cm" style="color: #998; font-style: italic;">/* show what we have, even if log is incomplete */</span></span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="c"></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="c"><span class="idiff left"> </span><span class="n" style="color: #333;"><span class="idiff">exit</span></span><span class="p"><span class="idiff">(</span></span><span class="mi" style="color: #099;"><span class="idiff right">1</span></span><span class="p">);</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="c"><span class="p"><span class="idiff left right">}</span></span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="c"><span class="k" style="font-weight: 600;"><span class="idiff left">static</span></span><span class="idiff"> </span><span class="kt" style="color: #458; font-weight: 600;"><span class="idiff">int</span></span><span class="idiff"> </span><span class="nf" style="color: #900; font-weight: 600;"><span class="idiff">usage</span></span><span class="idiff"> </span><span class="p"><span class="idiff">(</span></span><span class="kt" style="color: #458; font-weight: 600;"><span class="idiff">char</span></span><span class="idiff"> </span><span class="o" style="font-weight: 600;"><span class="idiff">*</span></span><span class="n" style="color: #333;"><span class="idiff right">exename</span></span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="c"><span class="k" style="font-weight: 600;"><span class="idiff left">static</span></span><span class="idiff"> </span><span class="kt" style="color: #458; font-weight: 600;"><span class="idiff">int</span></span><span class="idiff"> </span><span class="nf" style="color: #900; font-weight: 600;"><span class="idiff">parse_args</span></span><span class="idiff"> </span><span class="p"><span class="idiff">(</span></span><span class="kt" style="color: #458; font-weight: 600;"><span class="idiff">int</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">argc</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="kt" style="color: #458; font-weight: 600;"><span class="idiff">char</span></span><span class="idiff"> </span><span class="o" style="font-weight: 600;"><span class="idiff">**</span></span><span class="n" style="color: #333;"><span class="idiff">argv</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="kt" style="color: #458; font-weight: 600;"><span class="idiff">char</span></span><span class="idiff"> </span><span class="o" style="font-weight: 600;"><span class="idiff">**</span></span><span class="n" style="color: #333;"><span class="idiff">filename</span></span><span class="p"><span class="idiff right">);</span></span></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="c"></span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="c"><span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="nf" style="color: #900; font-weight: 600;">main</span><span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">argc</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">argv</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="c"><span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">mask</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">ret</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">i</span><span class="p">,</span> <span class="n" style="color: #333;">j</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">filename</span><span class="p">;</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -49,10 +48,7 @@ int main(int argc, char **argv)</td>
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49
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="c"> <span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">lustre_record_ref</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">lustre_rec_hash</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">;</span></span>
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50
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">mod_buf</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="c"></span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">argc</span> <span class="o" style="font-weight: 600;">!=</span> <span class="mi" style="color: #099;">2</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="c"> <span class="n" style="color: #333;">usage</span><span class="p">(</span><span class="n" style="color: #333;">argv</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]);</span></span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="c"></span>
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="c"> <span class="n" style="color: #333;">filename</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">argv</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">];</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="c"> <span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">parse_args</span><span class="p">(</span><span class="n" style="color: #333;">argc</span><span class="p">,</span> <span class="n" style="color: #333;">argv</span><span class="p">,</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">filename</span><span class="p">);</span></span>
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56
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52
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="c"></span>
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57
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53
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="c"> <span class="n" style="color: #333;">fd</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">darshan_log_open</span><span class="p">(</span><span class="n" style="color: #333;">filename</span><span class="p">);</span></span>
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58
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54
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">fd</span><span class="p">)</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -195,11 +191,44 @@ int main(int argc, char **argv)</td>
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195
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191
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="c"> <span class="k" style="font-weight: 600;">continue</span><span class="p">;</span></span>
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196
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192
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="c"></span>
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197
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193
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* print warning if this module only stored partial data */</span></span>
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198
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<pre style="margin: 0;">-<span id="LC198" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">DARSHAN_MOD_FLAG_ISSET</span><span class="p">(</span><span class="n" style="color: #333;">fd</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">partial_flag</span><span class="p">,</span> <span class="n" style="color: #333;">i</span><span class="p">))</span></span>
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199
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<pre style="margin: 0;">-<span id="LC199" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># *WARNING*: The %s module contains incomplete data!</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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200
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="c"> <span class="s" style="color: #d14;">"# This happens when a module runs out of</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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201
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<pre style="margin: 0;">-<span id="LC201" class="line" lang="c"> <span class="s" style="color: #d14;">"# memory to store new record data.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">,</span></span>
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202
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<pre style="margin: 0;">-<span id="LC202" class="line" lang="c"> <span class="n" style="color: #333;">darshan_module_names</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]);</span></span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">DARSHAN_MOD_FLAG_ISSET</span><span class="p">(</span><span class="n" style="color: #333;">fd</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">partial_flag</span><span class="p">,</span> <span class="n" style="color: #333;">i</span><span class="p">))</span> <span class="p">{</span></span>
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195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">OPTION_SHOW_INCOMPLETE</span><span class="p">)</span></span>
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196
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="c"> <span class="p">{</span></span>
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197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* user requested that we show the data we have anyway */</span></span>
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198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># *WARNING*: "</span></span>
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199
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="c"> <span class="s" style="color: #d14;">"The %s module contains incomplete data!</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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200
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="c"> <span class="s" style="color: #d14;">"# This happens when a module runs out of</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="c"> <span class="s" style="color: #d14;">"# memory to store new record data.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">,</span></span>
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202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="c"> <span class="n" style="color: #333;">darshan_module_names</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]);</span></span>
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203
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<pre style="margin: 0;">+<span id="LC203" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span></span>
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204
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="c"> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># To avoid this error, consult the darshan-runtime</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="c"> <span class="s" style="color: #d14;">"# documentation and consider setting the</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="c"> <span class="s" style="color: #d14;">"# DARSHAN_EXCLUDE_DIRS or DXT_TRIGGER_CONF_PATH</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="c"> <span class="s" style="color: #d14;">"# environment variable to prevent Darshan from</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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208
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="c"> <span class="s" style="color: #d14;">"# instrumenting unecessary files.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="c"> <span class="p">}</span></span>
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210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="c"> <span class="k" style="font-weight: 600;">else</span></span>
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211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="c"> <span class="p">{</span></span>
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212
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* hard error */</span></span>
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213
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># *ERROR*: "</span></span>
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214
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="c"> <span class="s" style="color: #d14;">"The %s module contains incomplete data!</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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215
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="c"> <span class="s" style="color: #d14;">"# This happens when a module runs out of</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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216
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="c"> <span class="s" style="color: #d14;">"# memory to store new record data.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">,</span></span>
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217
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="c"> <span class="n" style="color: #333;">darshan_module_names</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]);</span></span>
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218
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span></span>
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219
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="c"> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># To avoid this error, consult the darshan-runtime</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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220
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="c"> <span class="s" style="color: #d14;">"# documentation and consider setting the</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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221
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="c"> <span class="s" style="color: #d14;">"# DARSHAN_EXCLUDE_DIRS or DXT_TRIGGER_CONF_PATH</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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222
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="c"> <span class="s" style="color: #d14;">"# environment variable to prevent Darshan from</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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223
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<pre style="margin: 0;">+<span id="LC223" class="line" lang="c"> <span class="s" style="color: #d14;">"# instrumenting unecessary files.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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224
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span></span>
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<td class="diff-line-num new new_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
225
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<pre style="margin: 0;">+<span id="LC225" class="line" lang="c"> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># You can display the (incomplete) data that is</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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226
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<pre style="margin: 0;">+<span id="LC226" class="line" lang="c"> <span class="s" style="color: #d14;">"# present in this log using the --show-incomplete</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="c"> <span class="s" style="color: #d14;">"# option to darshan-dxt-parser.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="c"> <span class="k" style="font-weight: 600;">return</span><span class="p">(</span><span class="o" style="font-weight: 600;">-</span><span class="mi" style="color: #099;">1</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="c"> <span class="p">}</span></span>
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230
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="c"></span>
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="c"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC232" class="line" lang="c"></span>
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233
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<pre style="margin: 0;"> <span id="LC233" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* loop over each of this module's records and print them */</span></span>
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="c"> <span class="k" style="font-weight: 600;">while</span><span class="p">(</span><span class="mi" style="color: #099;">1</span><span class="p">)</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -311,6 +340,59 @@ cleanup:</td>
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<pre style="margin: 0;"> <span id="LC340" class="line" lang="c"> <span class="k" style="font-weight: 600;">return</span><span class="p">(</span><span class="n" style="color: #333;">ret</span><span class="p">);</span></span>
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341
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<pre style="margin: 0;"> <span id="LC341" class="line" lang="c"><span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC342" class="line" lang="c"></span>
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<pre style="margin: 0;">+<span id="LC343" class="line" lang="c"><span class="k" style="font-weight: 600;">static</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="nf" style="color: #900; font-weight: 600;">parse_args</span> <span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">argc</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">argv</span><span class="p">,</span> <span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">filename</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC344" class="line" lang="c"><span class="p">{</span></span>
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345
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<pre style="margin: 0;">+<span id="LC345" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">index</span><span class="p">;</span></span>
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346
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<pre style="margin: 0;">+<span id="LC346" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">mask</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC347" class="line" lang="c"> <span class="k" style="font-weight: 600;">static</span> <span class="k" style="font-weight: 600;">struct</span> <span class="n" style="color: #333;">option</span> <span class="n" style="color: #333;">long_opts</span><span class="p">[]</span> <span class="o" style="font-weight: 600;">=</span></span>
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348
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<pre style="margin: 0;">+<span id="LC348" class="line" lang="c"> <span class="p">{</span></span>
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349
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<pre style="margin: 0;">+<span id="LC349" class="line" lang="c"> <span class="p">{</span><span class="s" style="color: #d14;">"show-incomplete"</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">,</span> <span class="n" style="color: #333;">OPTION_SHOW_INCOMPLETE</span><span class="p">},</span></span>
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350
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<pre style="margin: 0;">+<span id="LC350" class="line" lang="c"> <span class="p">{</span><span class="s" style="color: #d14;">"help"</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">},</span></span>
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351
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<pre style="margin: 0;">+<span id="LC351" class="line" lang="c"> <span class="p">{</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">}</span></span>
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352
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<pre style="margin: 0;">+<span id="LC352" class="line" lang="c"> <span class="p">};</span></span>
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<pre style="margin: 0;">+<span id="LC353" class="line" lang="c"></span>
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354
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<pre style="margin: 0;">+<span id="LC354" class="line" lang="c"> <span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span><span class="p">;</span></span>
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355
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<pre style="margin: 0;">+<span id="LC355" class="line" lang="c"></span>
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<td class="diff-line-num new new_line" data-linenumber="356" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
356
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<pre style="margin: 0;">+<span id="LC356" class="line" lang="c"> <span class="k" style="font-weight: 600;">while</span><span class="p">(</span><span class="mi" style="color: #099;">1</span><span class="p">)</span></span>
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357
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<pre style="margin: 0;">+<span id="LC357" class="line" lang="c"> <span class="p">{</span></span>
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<td class="diff-line-num new new_line" data-linenumber="358" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
358
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<pre style="margin: 0;">+<span id="LC358" class="line" lang="c"> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">c</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">getopt_long</span><span class="p">(</span><span class="n" style="color: #333;">argc</span><span class="p">,</span> <span class="n" style="color: #333;">argv</span><span class="p">,</span> <span class="s" style="color: #d14;">""</span><span class="p">,</span> <span class="n" style="color: #333;">long_opts</span><span class="p">,</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">index</span><span class="p">);</span></span>
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359
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<pre style="margin: 0;">+<span id="LC359" class="line" lang="c"></span>
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360
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<pre style="margin: 0;">+<span id="LC360" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">c</span> <span class="o" style="font-weight: 600;">==</span> <span class="o" style="font-weight: 600;">-</span><span class="mi" style="color: #099;">1</span><span class="p">)</span> <span class="k" style="font-weight: 600;">break</span><span class="p">;</span></span>
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361
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<pre style="margin: 0;">+<span id="LC361" class="line" lang="c"></span>
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<td class="diff-line-num new new_line" data-linenumber="362" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
362
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<pre style="margin: 0;">+<span id="LC362" class="line" lang="c"> <span class="k" style="font-weight: 600;">switch</span><span class="p">(</span><span class="n" style="color: #333;">c</span><span class="p">)</span></span>
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363
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<pre style="margin: 0;">+<span id="LC363" class="line" lang="c"> <span class="p">{</span></span>
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<td class="diff-line-num new new_line" data-linenumber="364" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
364
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<pre style="margin: 0;">+<span id="LC364" class="line" lang="c"> <span class="k" style="font-weight: 600;">case</span> <span class="n" style="color: #333;">OPTION_SHOW_INCOMPLETE</span><span class="p">:</span></span>
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<td class="diff-line-num new new_line" data-linenumber="365" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
365
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<pre style="margin: 0;">+<span id="LC365" class="line" lang="c"> <span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">|=</span> <span class="n" style="color: #333;">c</span><span class="p">;</span></span>
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366
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<pre style="margin: 0;">+<span id="LC366" class="line" lang="c"> <span class="k" style="font-weight: 600;">break</span><span class="p">;</span></span>
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<td class="diff-line-num new new_line" data-linenumber="367" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
367
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<pre style="margin: 0;">+<span id="LC367" class="line" lang="c"> <span class="k" style="font-weight: 600;">case</span> <span class="mi" style="color: #099;">0</span><span class="p">:</span></span>
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368
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<pre style="margin: 0;">+<span id="LC368" class="line" lang="c"> <span class="k" style="font-weight: 600;">case</span> <span class="sc" style="color: #d14;">'?'</span><span class="p">:</span></span>
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369
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<pre style="margin: 0;">+<span id="LC369" class="line" lang="c"> <span class="nl">default:</span></span>
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370
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<pre style="margin: 0;">+<span id="LC370" class="line" lang="c"> <span class="n" style="color: #333;">usage</span><span class="p">(</span><span class="n" style="color: #333;">argv</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]);</span></span>
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371
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<pre style="margin: 0;">+<span id="LC371" class="line" lang="c"> <span class="k" style="font-weight: 600;">break</span><span class="p">;</span></span>
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372
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<pre style="margin: 0;">+<span id="LC372" class="line" lang="c"> <span class="p">}</span></span>
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373
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<pre style="margin: 0;">+<span id="LC373" class="line" lang="c"> <span class="p">}</span></span>
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374
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<pre style="margin: 0;">+<span id="LC374" class="line" lang="c"></span>
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375
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<pre style="margin: 0;">+<span id="LC375" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">optind</span> <span class="o" style="font-weight: 600;"><</span> <span class="n" style="color: #333;">argc</span><span class="p">)</span></span>
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376
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<pre style="margin: 0;">+<span id="LC376" class="line" lang="c"> <span class="p">{</span></span>
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377
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<pre style="margin: 0;">+<span id="LC377" class="line" lang="c"> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">filename</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">argv</span><span class="p">[</span><span class="n" style="color: #333;">optind</span><span class="p">];</span></span>
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378
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<pre style="margin: 0;">+<span id="LC378" class="line" lang="c"> <span class="p">}</span></span>
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379
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<pre style="margin: 0;">+<span id="LC379" class="line" lang="c"> <span class="k" style="font-weight: 600;">else</span></span>
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380
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<pre style="margin: 0;">+<span id="LC380" class="line" lang="c"> <span class="p">{</span></span>
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<td class="diff-line-num new new_line" data-linenumber="381" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
381
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<pre style="margin: 0;">+<span id="LC381" class="line" lang="c"> <span class="n" style="color: #333;">usage</span><span class="p">(</span><span class="n" style="color: #333;">argv</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]);</span></span>
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382
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<pre style="margin: 0;">+<span id="LC382" class="line" lang="c"> <span class="p">}</span></span>
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383
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<pre style="margin: 0;">+<span id="LC383" class="line" lang="c"></span>
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<td class="diff-line-num new new_line" data-linenumber="384" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
384
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<pre style="margin: 0;">+<span id="LC384" class="line" lang="c"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">mask</span><span class="p">;</span></span>
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<td class="diff-line-num new new_line" data-linenumber="385" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
385
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<pre style="margin: 0;">+<span id="LC385" class="line" lang="c"><span class="p">}</span></span>
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386
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<pre style="margin: 0;">+<span id="LC386" class="line" lang="c"></span>
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<td class="diff-line-num new new_line" data-linenumber="387" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
387
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<pre style="margin: 0;">+<span id="LC387" class="line" lang="c"><span class="k" style="font-weight: 600;">static</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="nf" style="color: #900; font-weight: 600;">usage</span> <span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">char</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">exename</span><span class="p">)</span></span>
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388
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<pre style="margin: 0;">+<span id="LC388" class="line" lang="c"><span class="p">{</span></span>
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<td class="diff-line-num new new_line" data-linenumber="389" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
389
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<pre style="margin: 0;">+<span id="LC389" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span> <span class="s" style="color: #d14;">"Usage: %s [options] <filename></span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">,</span> <span class="n" style="color: #333;">exename</span><span class="p">);</span></span>
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390
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<pre style="margin: 0;">+<span id="LC390" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span> <span class="s" style="color: #d14;">" --show-incomplete : display results even if log is incomplete</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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391
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<pre style="margin: 0;">+<span id="LC391" class="line" lang="c"></span>
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<td class="diff-line-num new new_line" data-linenumber="392" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
392
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<pre style="margin: 0;">+<span id="LC392" class="line" lang="c"> <span class="n" style="color: #333;">exit</span><span class="p">(</span><span class="mi" style="color: #099;">1</span><span class="p">);</span></span>
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393
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<pre style="margin: 0;">+<span id="LC393" class="line" lang="c"><span class="p">}</span></span>
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394
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<pre style="margin: 0;">+<span id="LC394" class="line" lang="c"></span>
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395
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<pre style="margin: 0;">+<span id="LC395" class="line" lang="c"></span>
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314
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396
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<pre style="margin: 0;"> <span id="LC396" class="line" lang="c"><span class="cm" style="color: #998; font-style: italic;">/*</span></span>
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315
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<td class="diff-line-num new_line" data-linenumber="397" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
397
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<pre style="margin: 0;"> <span id="LC397" class="line" lang="c"><span class="cm" style="color: #998; font-style: italic;"> * Local variables:</span></span>
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316
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398
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<pre style="margin: 0;"> <span id="LC398" class="line" lang="c"><span class="cm" style="color: #998; font-style: italic;"> * c-indent-level: 4</span></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/ff9791e3e7adfc95896b237155d9a43da4d63808#8f5ddb6450af14a90ba411fa534122256b3aea08"><strong>darshan-util/darshan-job-summary/bin/darshan-job-summary.pl.in</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -54,7 +54,10 @@ if ($verbose_flag)</td>
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54
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54
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="perl"> <span class="k" style="font-weight: 600;">print</span> <span class="p">"</span><span class="s2" style="color: #d14;">verbose: </span><span class="si" style="color: #d14;">$tmp_dir</span><span class="se" style="color: #d14;">\n</span><span class="p">";</span></span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="perl"><span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="perl"></span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="perl"><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="nv" style="color: #008080;">PARSE_OUT</span><span class="p">,</span> <span class="p">"</span><span class="si" style="color: #d14;">$darshan_parser</span><span class="s2" style="color: #d14;"> --base --perf </span><span class="si" style="color: #d14;">$input_file</span><span class="s2" style="color: #d14;"> |</span><span class="p">")</span> <span class="o" style="font-weight: 600;">||</span> <span class="nb" style="color: #0086b3;">die</span><span class="p">("</span><span class="s2" style="color: #d14;">Can't execute </span><span class="se" style="color: #d14;">\"</span><span class="si" style="color: #d14;">$darshan_parser</span><span class="s2" style="color: #d14;"> </span><span class="si" style="color: #d14;">$input_file</span><span class="se" style="color: #d14;">\"</span><span class="s2" style="color: #d14;">: $!</span><span class="se" style="color: #d14;">\n</span><span class="p">");</span></span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="perl"><span class="c1" style="color: #998; font-style: italic;"># Note that we use the --show-incomplete option here because</span></span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="perl"><span class="c1" style="color: #998; font-style: italic;"># darshan-job-summary will display a clear warning if this condition is</span></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="perl"><span class="c1" style="color: #998; font-style: italic;"># encountered anyway.</span></span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="perl"><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="nv" style="color: #008080;">PARSE_OUT</span><span class="p">,</span> <span class="p">"</span><span class="si" style="color: #d14;">$darshan_parser</span><span class="s2" style="color: #d14;"> --show-incomplete --base --perf </span><span class="si" style="color: #d14;">$input_file</span><span class="s2" style="color: #d14;"> |</span><span class="p">")</span> <span class="o" style="font-weight: 600;">||</span> <span class="nb" style="color: #0086b3;">die</span><span class="p">("</span><span class="s2" style="color: #d14;">Can't execute </span><span class="se" style="color: #d14;">\"</span><span class="si" style="color: #d14;">$darshan_parser</span><span class="s2" style="color: #d14;"> </span><span class="si" style="color: #d14;">$input_file</span><span class="se" style="color: #d14;">\"</span><span class="s2" style="color: #d14;">: $!</span><span class="se" style="color: #d14;">\n</span><span class="p">");</span></span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="perl"></span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="perl"><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="nv" style="color: #008080;">FA_READ</span><span class="p">,</span> <span class="p">"</span><span class="s2" style="color: #d14;">></span><span class="si" style="color: #d14;">$tmp_dir</span><span class="s2" style="color: #d14;">/file-access-read.dat</span><span class="p">")</span> <span class="o" style="font-weight: 600;">||</span> <span class="nb" style="color: #0086b3;">die</span><span class="p">("</span><span class="s2" style="color: #d14;">error opening output file: $!</span><span class="se" style="color: #d14;">\n</span><span class="p">");</span></span>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="perl"><span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="nv" style="color: #008080;">FA_WRITE</span><span class="p">,</span> <span class="p">"</span><span class="s2" style="color: #d14;">></span><span class="si" style="color: #d14;">$tmp_dir</span><span class="s2" style="color: #d14;">/file-access-write.dat</span><span class="p">")</span> <span class="o" style="font-weight: 600;">||</span> <span class="nb" style="color: #0086b3;">die</span><span class="p">("</span><span class="s2" style="color: #d14;">error opening output file: $!</span><span class="se" style="color: #d14;">\n</span><span class="p">");</span></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/ff9791e3e7adfc95896b237155d9a43da4d63808#e464f224521a25913828715e485170d093715db6"><strong>darshan-util/darshan-job-summary/share/summary.tex</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -37,8 +37,9 @@</td>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="tex"><span class="k" style="font-weight: 600;">\twocolumn</span>[</span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="tex"><span class="k" style="font-weight: 600;">\vspace</span><span class="p">{</span>3.5in<span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="tex"><span class="k" style="font-weight: 600;">\center</span></span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="tex"><span class="p">{</span><span class="k" style="font-weight: 600;">\bf</span> <span class="k" style="font-weight: 600;">\textcolor</span><span class="p">{</span>red<span class="p">}{</span>WARNING<span class="p">}}</span>: This Darshan log contains incomplete data</span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="tex">which may skew results in this document.</span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="tex"><span class="p">{</span><span class="k" style="font-weight: 600;">\bf</span> <span class="k" style="font-weight: 600;">\textcolor</span><span class="p">{</span>red<span class="p">}{</span>WARNING<span class="p">}}</span>: This Darshan log contains incomplete data.</span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="tex">This happens when a module runs out of memory to store new record data.</span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="tex">Please run darshan-parser on the log file for more information.</span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="tex"><span class="k" style="font-weight: 600;">\endcenter</span></span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="tex">]</span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="tex"><span class="k" style="font-weight: 600;">\newpage</span></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/ff9791e3e7adfc95896b237155d9a43da4d63808#5c9b340a45c83d9810991e129cd21ae08663409d"><strong>darshan-util/darshan-parser.c</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -29,13 +29,15 @@</td>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define OPTION_FILE (1 << 3) </span><span class="cm" style="color: #998; font-style: italic;">/* file count totals */</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define OPTION_FILE_LIST (1 << 4) </span><span class="cm" style="color: #998; font-style: italic;">/* per-file summaries */</span></span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define OPTION_FILE_LIST_DETAILED (1 << 6) </span><span class="cm" style="color: #998; font-style: italic;">/* per-file summaries with extra detail */</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define OPTION_SHOW_INCOMPLETE (1 << 7) </span><span class="cm" style="color: #998; font-style: italic;">/* show what we have, even if log is incomplete */</span></span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define OPTION_ALL (\</span></span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> OPTION_BASE|\</span></span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> OPTION_TOTAL|\</span></span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> OPTION_PERF|\</span></span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> OPTION_FILE|\</span></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> OPTION_FILE_LIST|\</span></span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> OPTION_FILE_LIST_DETAILED)</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> OPTION_FILE_LIST_DETAILED|\</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;"> OPTION_SHOW_INCOMPLETE)</span></span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="c"></span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define FILETYPE_SHARED (1 << 0)</span></span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define FILETYPE_UNIQUE (1 << 1)</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -131,6 +133,7 @@ int usage (char *exename)</td>
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133
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span> <span class="s" style="color: #d14;">" --file-list-detailed : per-file summaries with additional detail</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span> <span class="s" style="color: #d14;">" --perf : derived perf data</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span> <span class="s" style="color: #d14;">" --total : aggregated darshan field data</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span> <span class="s" style="color: #d14;">" --show-incomplete : display results even if log is incomplete</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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137
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<pre style="margin: 0;"> <span id="LC137" class="line" lang="c"></span>
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<td class="diff-line-num old_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
135
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<td class="diff-line-num new_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
138
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="c"> <span class="n" style="color: #333;">exit</span><span class="p">(</span><span class="mi" style="color: #099;">1</span><span class="p">);</span></span>
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<td class="diff-line-num old_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
136
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<td class="diff-line-num new_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
139
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<pre style="margin: 0;"> <span id="LC139" class="line" lang="c"><span class="p">}</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -148,6 +151,7 @@ int parse_args (int argc, char **argv, char **filename)</td>
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<td class="diff-line-num old_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
148
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<td class="diff-line-num new_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
151
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<pre style="margin: 0;"> <span id="LC151" class="line" lang="c"> <span class="p">{</span><span class="s" style="color: #d14;">"file-list-detailed"</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">,</span> <span class="n" style="color: #333;">OPTION_FILE_LIST_DETAILED</span><span class="p">},</span></span>
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<td class="diff-line-num old_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
149
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<td class="diff-line-num new_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
152
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<pre style="margin: 0;"> <span id="LC152" class="line" lang="c"> <span class="p">{</span><span class="s" style="color: #d14;">"perf"</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">,</span> <span class="n" style="color: #333;">OPTION_PERF</span><span class="p">},</span></span>
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<td class="diff-line-num old_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
150
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<td class="diff-line-num new_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
153
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="c"> <span class="p">{</span><span class="s" style="color: #d14;">"total"</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">,</span> <span class="n" style="color: #333;">OPTION_TOTAL</span><span class="p">},</span></span>
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<td class="diff-line-num new old_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="c"> <span class="p">{</span><span class="s" style="color: #d14;">"show-incomplete"</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">,</span> <span class="n" style="color: #333;">OPTION_SHOW_INCOMPLETE</span><span class="p">},</span></span>
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<td class="diff-line-num old_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
151
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<td class="diff-line-num new_line" data-linenumber="155" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
155
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<pre style="margin: 0;"> <span id="LC155" class="line" lang="c"> <span class="p">{</span><span class="s" style="color: #d14;">"help"</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">NULL</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">},</span></span>
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<td class="diff-line-num old_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
152
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<td class="diff-line-num new_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
156
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<pre style="margin: 0;"> <span id="LC156" class="line" lang="c"> <span class="p">{</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">}</span></span>
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<td class="diff-line-num old_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
153
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<td class="diff-line-num new_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
157
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="c"> <span class="p">};</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -169,6 +173,7 @@ int parse_args (int argc, char **argv, char **filename)</td>
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<td class="diff-line-num old_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
169
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<td class="diff-line-num new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
173
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="c"> <span class="k" style="font-weight: 600;">case</span> <span class="n" style="color: #333;">OPTION_FILE_LIST_DETAILED</span><span class="p">:</span></span>
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<td class="diff-line-num old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
170
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<td class="diff-line-num new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
174
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<pre style="margin: 0;"> <span id="LC174" class="line" lang="c"> <span class="k" style="font-weight: 600;">case</span> <span class="n" style="color: #333;">OPTION_PERF</span><span class="p">:</span></span>
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<td class="diff-line-num old_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
171
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<td class="diff-line-num new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
175
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<pre style="margin: 0;"> <span id="LC175" class="line" lang="c"> <span class="k" style="font-weight: 600;">case</span> <span class="n" style="color: #333;">OPTION_TOTAL</span><span class="p">:</span></span>
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<td class="diff-line-num new old_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="c"> <span class="k" style="font-weight: 600;">case</span> <span class="n" style="color: #333;">OPTION_SHOW_INCOMPLETE</span><span class="p">:</span></span>
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<td class="diff-line-num old_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
172
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<td class="diff-line-num new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
177
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="c"> <span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">|=</span> <span class="n" style="color: #333;">c</span><span class="p">;</span></span>
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<td class="diff-line-num old_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
173
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<td class="diff-line-num new_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
178
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<pre style="margin: 0;"> <span id="LC178" class="line" lang="c"> <span class="k" style="font-weight: 600;">break</span><span class="p">;</span></span>
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<td class="diff-line-num old_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
174
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<td class="diff-line-num new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
179
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<pre style="margin: 0;"> <span id="LC179" class="line" lang="c"> <span class="k" style="font-weight: 600;">case</span> <span class="mi" style="color: #099;">0</span><span class="p">:</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -189,9 +194,9 @@ int parse_args (int argc, char **argv, char **filename)</td>
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<td class="diff-line-num old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
189
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<td class="diff-line-num new_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
194
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="c"> <span class="p">}</span></span>
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<td class="diff-line-num old_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
190
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<td class="diff-line-num new_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="c"></span>
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<td class="diff-line-num old_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
191
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<td class="diff-line-num new_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
196
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* default mask value if none specified */</span></span>
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<td class="diff-line-num old old_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
192
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<td class="diff-line-num new_line old" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC192" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span><span class="idiff left"> </span><span class="o" style="font-weight: 600;"><span class="idiff">||</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">mask</span></span><span class="idiff"> </span><span class="o" style="font-weight: 600;"><span class="idiff">==</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff right">OPTION_SHOW_INCOMPLETE</span></span><span class="p">)</span></span>
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193
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198
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="c"> <span class="p">{</span></span>
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194
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<pre style="margin: 0;">-<span id="LC194" class="line" lang="c"> <span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">OPTION_BASE</span><span class="p">;</span></span>
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199
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="c"> <span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;"><span class="idiff left right">|</span>=</span> <span class="n" style="color: #333;">OPTION_BASE</span><span class="p">;</span></span>
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195
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200
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="c"> <span class="p">}</span></span>
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196
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201
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<pre style="margin: 0;"> <span id="LC201" class="line" lang="c"></span>
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197
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202
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<pre style="margin: 0;"> <span id="LC202" class="line" lang="c"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">mask</span><span class="p">;</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="357" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="362" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -357,7 +362,6 @@ int main(int argc, char **argv)</td>
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357
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362
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<pre style="margin: 0;"> <span id="LC362" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"# <fs type>: type of file system that the file resides on.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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358
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363
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<pre style="margin: 0;"> <span id="LC363" class="line" lang="c"> <span class="p">}</span></span>
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359
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364
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<pre style="margin: 0;"> <span id="LC364" class="line" lang="c"></span>
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360
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<pre style="margin: 0;">-<span id="LC360" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* warn user if this log file is incomplete */</span></span>
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361
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365
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<pre style="margin: 0;"> <span id="LC365" class="line" lang="c"> <span class="n" style="color: #333;">pdata</span><span class="p">.</span><span class="n" style="color: #333;">rank_cumul_io_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">malloc</span><span class="p">(</span><span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">double</span><span class="p">)</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">job</span><span class="p">.</span><span class="n" style="color: #333;">nprocs</span><span class="p">);</span></span>
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362
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366
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<pre style="margin: 0;"> <span id="LC366" class="line" lang="c"> <span class="n" style="color: #333;">pdata</span><span class="p">.</span><span class="n" style="color: #333;">rank_cumul_md_time</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">malloc</span><span class="p">(</span><span class="k" style="font-weight: 600;">sizeof</span><span class="p">(</span><span class="kt" style="color: #458; font-weight: 600;">double</span><span class="p">)</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">job</span><span class="p">.</span><span class="n" style="color: #333;">nprocs</span><span class="p">);</span></span>
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363
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367
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<pre style="margin: 0;"> <span id="LC367" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">pdata</span><span class="p">.</span><span class="n" style="color: #333;">rank_cumul_io_time</span> <span class="o" style="font-weight: 600;">||</span> <span class="o" style="font-weight: 600;">!</span><span class="n" style="color: #333;">pdata</span><span class="p">.</span><span class="n" style="color: #333;">rank_cumul_md_time</span><span class="p">)</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="413" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="417" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -413,11 +417,41 @@ int main(int argc, char **argv)</td>
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413
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417
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<pre style="margin: 0;"> <span id="LC417" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"# *******************************************************</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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414
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418
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<pre style="margin: 0;"> <span id="LC418" class="line" lang="c"></span>
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415
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419
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<pre style="margin: 0;"> <span id="LC419" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* print warning if this module only stored partial data */</span></span>
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416
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<pre style="margin: 0;">-<span id="LC416" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">DARSHAN_MOD_FLAG_ISSET</span><span class="p">(</span><span class="n" style="color: #333;">fd</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">partial_flag</span><span class="p">,</span> <span class="n" style="color: #333;">i</span><span class="p">))</span></span>
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417
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<pre style="margin: 0;">-<span id="LC417" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># *WARNING*: The %s module contains incomplete data!</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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418
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<pre style="margin: 0;">-<span id="LC418" class="line" lang="c"> <span class="s" style="color: #d14;">"# This happens when a module runs out of</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">-<span id="LC419" class="line" lang="c"> <span class="s" style="color: #d14;">"# memory to store new record data.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC420" class="line" lang="c"> <span class="n" style="color: #333;">darshan_module_names</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]);</span></span>
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420
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<pre style="margin: 0;">+<span id="LC420" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">DARSHAN_MOD_FLAG_ISSET</span><span class="p">(</span><span class="n" style="color: #333;">fd</span><span class="o" style="font-weight: 600;">-></span><span class="n" style="color: #333;">partial_flag</span><span class="p">,</span> <span class="n" style="color: #333;">i</span><span class="p">))</span> <span class="p">{</span></span>
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421
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<pre style="margin: 0;">+<span id="LC421" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">OPTION_SHOW_INCOMPLETE</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC422" class="line" lang="c"> <span class="p">{</span></span>
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423
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<pre style="margin: 0;">+<span id="LC423" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* user requested that we show the data we have anyway */</span></span>
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424
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<pre style="margin: 0;">+<span id="LC424" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span><span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># *WARNING*: "</span></span>
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<pre style="margin: 0;">+<span id="LC425" class="line" lang="c"> <span class="s" style="color: #d14;">"The %s module contains incomplete data!</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC426" class="line" lang="c"> <span class="s" style="color: #d14;">"# This happens when a module runs out of</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC427" class="line" lang="c"> <span class="s" style="color: #d14;">"# memory to store new record data.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC428" class="line" lang="c"> <span class="n" style="color: #333;">darshan_module_names</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]);</span></span>
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<pre style="margin: 0;">+<span id="LC429" class="line" lang="c"> <span class="n" style="color: #333;">printf</span><span class="p">(</span></span>
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<pre style="margin: 0;">+<span id="LC430" class="line" lang="c"> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># To avoid this error, consult the darshan-runtime</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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431
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<pre style="margin: 0;">+<span id="LC431" class="line" lang="c"> <span class="s" style="color: #d14;">"# documentation and consider setting the</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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432
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<pre style="margin: 0;">+<span id="LC432" class="line" lang="c"> <span class="s" style="color: #d14;">"# DARSHAN_EXCLUDE_DIRS environment variable to prevent</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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433
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<pre style="margin: 0;">+<span id="LC433" class="line" lang="c"> <span class="s" style="color: #d14;">"# Darshan from instrumenting unecessary files.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC434" class="line" lang="c"> <span class="p">}</span></span>
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435
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<pre style="margin: 0;">+<span id="LC435" class="line" lang="c"> <span class="k" style="font-weight: 600;">else</span></span>
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<pre style="margin: 0;">+<span id="LC436" class="line" lang="c"> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC437" class="line" lang="c"> <span class="cm" style="color: #998; font-style: italic;">/* hard error */</span></span>
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438
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<pre style="margin: 0;">+<span id="LC438" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># *ERROR*: "</span></span>
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<pre style="margin: 0;">+<span id="LC439" class="line" lang="c"> <span class="s" style="color: #d14;">"The %s module contains incomplete data!</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC440" class="line" lang="c"> <span class="s" style="color: #d14;">"# This happens when a module runs out of</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC441" class="line" lang="c"> <span class="s" style="color: #d14;">"# memory to store new record data.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">,</span></span>
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442
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<pre style="margin: 0;">+<span id="LC442" class="line" lang="c"> <span class="n" style="color: #333;">darshan_module_names</span><span class="p">[</span><span class="n" style="color: #333;">i</span><span class="p">]);</span></span>
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443
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<pre style="margin: 0;">+<span id="LC443" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC444" class="line" lang="c"> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># To avoid this error, consult the darshan-runtime</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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445
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<pre style="margin: 0;">+<span id="LC445" class="line" lang="c"> <span class="s" style="color: #d14;">"# documentation and consider setting the</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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446
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<pre style="margin: 0;">+<span id="LC446" class="line" lang="c"> <span class="s" style="color: #d14;">"# DARSHAN_EXCLUDE_DIRS environment variable to prevent</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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447
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<pre style="margin: 0;">+<span id="LC447" class="line" lang="c"> <span class="s" style="color: #d14;">"# Darshan from instrumenting unecessary files.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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448
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<pre style="margin: 0;">+<span id="LC448" class="line" lang="c"> <span class="n" style="color: #333;">fprintf</span><span class="p">(</span><span class="n" style="color: #333;">stderr</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC449" class="line" lang="c"> <span class="s" style="color: #d14;">"</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;"># You can display the (incomplete) data that is</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC450" class="line" lang="c"> <span class="s" style="color: #d14;">"# present in this log using the --show-incomplete</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC451" class="line" lang="c"> <span class="s" style="color: #d14;">"# option to darshan-parser.</span><span class="se" style="color: #d14;">\n</span><span class="s" style="color: #d14;">"</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC452" class="line" lang="c"> <span class="k" style="font-weight: 600;">return</span><span class="p">(</span><span class="o" style="font-weight: 600;">-</span><span class="mi" style="color: #099;">1</span><span class="p">);</span></span>
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<pre style="margin: 0;">+<span id="LC453" class="line" lang="c"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC454" class="line" lang="c"> <span class="p">}</span></span>
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455
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<pre style="margin: 0;"> <span id="LC455" class="line" lang="c"></span>
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456
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<pre style="margin: 0;"> <span id="LC456" class="line" lang="c"> <span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="n" style="color: #333;">mask</span> <span class="o" style="font-weight: 600;">&</span> <span class="n" style="color: #333;">OPTION_BASE</span><span class="p">)</span></span>
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457
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<pre style="margin: 0;"> <span id="LC457" class="line" lang="c"> <span class="p">{</span></span>
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