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<h3>
Philip Carns pushed to branch master
at <a href="https://xgitlab.cels.anl.gov/darshan/darshan">darshan / darshan</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/c436afe9b824341ca2aa4f2f60c03e82a7a62f14">c436afe9</a></strong>
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<span>by Phil Carns</span>
<i>at 2021-03-11T10:11:19-05:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">convert dxt_analyzier to python3
- includes changes suggested by futurize utility
</pre>
</li>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/commit/8f4cdc1cd2d33e63aa85bf513f9e91246aea68c2">8f4cdc1c</a></strong>
<div>
<span>by Philip Carns</span>
<i>at 2021-03-11T09:12:38-06:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge branch 'carns/issue-310-dxt-analyzer-python3' into 'master'
convert dxt_analyzier to python3
Closes #310
See merge request darshan/darshan!82</pre>
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<h4>1 changed file:</h4>
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<a href="#5a1b23e7d655a4b1f532a4b541f0b992e316f84b">
darshan-util/dxt_analyzer.py
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<h4>Changes:</h4>
<li id="5a1b23e7d655a4b1f532a4b541f0b992e316f84b">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/-/compare/913450d75064bb78bd76d7b286fcd6a1317bf1bf...8f4cdc1cd2d33e63aa85bf513f9e91246aea68c2#5a1b23e7d655a4b1f532a4b541f0b992e316f84b"><strong>darshan-util/dxt_analyzer.py</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#!/usr/bin/env python<span class="idiff left right">2</span></span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#!/usr/bin/env python<span class="idiff left right">3</span></span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">###</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="73" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="73" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -73,6 +73,7 @@ python dxt_analyzer.py -i darshan_dxt-v.txt</td>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="python"><span class="s" style="color: #d14;">'''</span></span>
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">builtins</span> <span class="kn" style="font-weight: 600;">import</span> <span class="nb" style="color: #0086b3;">str</span></span>
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<pre style="margin: 0;"> <span id="LC77" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">numpy</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">np</span></span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">matplotlib</span></span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#matplotlib.use('PDF')</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -111,7 +112,7 @@ def store_useful_comment(pieces, finfo_dict, curr_fname):</td>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="python"><span class="s" style="color: #d14;"> attribute = pieces[0].replace('# DXT, ', '')</span></span>
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="python"><span class="s" style="color: #d14;"> if attribute=='file_id':</span></span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="python"><span class="s" style="color: #d14;"> curr_fname = pieces[2].replace(' ','').rstrip('</span><span class="si" style="color: #d14;">\</span><span class="se" style="color: #d14;">n</span><span class="s" style="color: #d14;">')</span></span>
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<pre style="margin: 0;">-<span id="LC114" class="line" lang="python"><span class="s" style="color: #d14;"> if curr_fname not in <span class="idiff left right">finfo_dict.keys(</span>):</span></span>
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="python"><span class="s" style="color: #d14;"> if curr_fname not in <span class="idiff left right">list(finfo_dict.keys()</span>):</span></span>
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<pre style="margin: 0;"> <span id="LC116" class="line" lang="python"><span class="s" style="color: #d14;"> finfo_dict[curr_fname] = {'mount':'', 'fs':'', 'stripe_size':-1, 'stripe_width':-1, 'OST_list':[]}</span></span>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="python"><span class="s" style="color: #d14;"> return curr_fname</span></span>
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<pre style="margin: 0;"> <span id="LC118" class="line" lang="python"><span class="s" style="color: #d14;"> elif attribute=='mnt_pt':</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -185,9 +186,9 @@ def parse_dxt_log_line(line, curr_fname, finfo_dict):</td>
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="python"><span class="s" style="color: #d14;">def get_verts_file(data, module, fname, action):</span></span>
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="python"><span class="s" style="color: #d14;"> '''</span><span class="n" style="color: #333;">make</span> <span class="n" style="color: #333;">a</span> <span class="nb" style="color: #0086b3;">list</span> <span class="n" style="color: #333;">of</span> <span class="n" style="color: #333;">rectangle</span> <span class="n" style="color: #333;">vertices</span> <span class="n" style="color: #333;">to</span> <span class="n" style="color: #333;">plot</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">posix</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">mpi</span> <span class="n" style="color: #333;">read</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">write</span> <span class="n" style="color: #333;">activity</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">each</span> <span class="n" style="color: #333;">rank</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">specific</span> <span class="nb" style="color: #0086b3;">file</span><span class="s" style="color: #d14;">'''</span></span>
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="python"><span class="s" style="color: #d14;"> keyword = module+'_'+action</span></span>
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<pre style="margin: 0;">-<span id="LC188" class="line" lang="python"><span class="s" style="color: #d14;"> filedata = <span class="idiff left right">map(lambda x: x[1], filter(lambda x: x[0]==fname, data))</span></span></span>
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<pre style="margin: 0;">-<span id="LC189" class="line" lang="python"><span class="s" style="color: #d14;"> filtered = <span class="idiff left right">map(lambda x: x[1], filter(lambda x: x[0]==keyword, filedata))</span></span></span>
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<pre style="margin: 0;">-<span id="LC190" class="line" lang="python"><span class="s" style="color: #d14;"> activities = <span class="idiff left right">map(lambda x: (x[0], (x[2], x[3])), filtered)</span></span></span>
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="python"><span class="s" style="color: #d14;"> filedata = <span class="idiff left right">[x[1] for x in [x for x in data if x[0]==fname]]</span></span></span>
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="python"><span class="s" style="color: #d14;"> filtered = <span class="idiff left right">[x[1] for x in [x for x in filedata if x[0]==keyword]]</span></span></span>
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="python"><span class="s" style="color: #d14;"> activities = <span class="idiff left right">[(x[0], (x[2], x[3])) for x in filtered]</span></span></span>
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="python"><span class="s" style="color: #d14;"> verts = np.zeros((1,4,2))</span></span>
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="python"><span class="s" style="color: #d14;"> for entry in activities:</span></span>
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="python"><span class="s" style="color: #d14;"> lx,rx,by,ty = entry[1][0], entry[1][1], entry[0] - 0.5 , entry[0] + 0.5</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -199,9 +200,9 @@ def get_verts_file(data, module, fname, action):</td>
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="python"><span class="s" style="color: #d14;">def get_verts_all(data, module, action):</span></span>
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<pre style="margin: 0;"> <span id="LC201" class="line" lang="python"><span class="s" style="color: #d14;"> '''</span><span class="n" style="color: #333;">make</span> <span class="n" style="color: #333;">a</span> <span class="nb" style="color: #0086b3;">list</span> <span class="n" style="color: #333;">of</span> <span class="n" style="color: #333;">rectangle</span> <span class="n" style="color: #333;">vertices</span> <span class="n" style="color: #333;">to</span> <span class="n" style="color: #333;">plot</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">posix</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">mpi</span> <span class="n" style="color: #333;">read</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">write</span> <span class="n" style="color: #333;">activity</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">each</span> <span class="n" style="color: #333;">rank</span><span class="s" style="color: #d14;">'''</span></span>
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<pre style="margin: 0;"> <span id="LC202" class="line" lang="python"><span class="s" style="color: #d14;"> keyword = module+'_'+action</span></span>
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<pre style="margin: 0;">-<span id="LC202" class="line" lang="python"><span class="s" style="color: #d14;"> IOdata = <span class="idiff left right">map(lambda x: x[1], data)</span></span></span>
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<pre style="margin: 0;">-<span id="LC203" class="line" lang="python"><span class="s" style="color: #d14;"> filtered = <span class="idiff left right">map(lambda x: x[1], filter(lambda x: x[0]==keyword, IOdata))</span></span></span>
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<pre style="margin: 0;">-<span id="LC204" class="line" lang="python"><span class="s" style="color: #d14;"> activities = <span class="idiff left right">map(lambda x: (x[0], (x[2], x[3])), filtered)</span></span></span>
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<pre style="margin: 0;">+<span id="LC203" class="line" lang="python"><span class="s" style="color: #d14;"> IOdata = <span class="idiff left right">[x[1] for x in data]</span></span></span>
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="python"><span class="s" style="color: #d14;"> filtered = <span class="idiff left right">[x[1] for x in [x for x in IOdata if x[0]==keyword]]</span></span></span>
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="python"><span class="s" style="color: #d14;"> activities = <span class="idiff left right">[(x[0], (x[2], x[3])) for x in filtered]</span></span></span>
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<pre style="margin: 0;"> <span id="LC206" class="line" lang="python"><span class="s" style="color: #d14;"> verts = np.zeros((1,4,2))</span></span>
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<pre style="margin: 0;"> <span id="LC207" class="line" lang="python"><span class="s" style="color: #d14;"> for entry in activities:</span></span>
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="python"><span class="s" style="color: #d14;"> lx,rx,by,ty = entry[1][0], entry[1][1], entry[0] - 0.5 , entry[0] + 0.5</span></span>
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