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<h3>
Philip Carns pushed to branch carns/dev-dyn-link-updates
at <a href="https://xgitlab.cels.anl.gov/darshan/darshan">darshan / darshan</a>
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<h4>
Commits:
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<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/commit/fe91e0ff19a7721e64cc8546bc7fa77bab8e7bc7">fe91e0ff</a></strong>
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<span>by Phil Carns</span>
<i>at 2020-03-20T14:46:03-04:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">propagate darshan-gen* script updates to fortran
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<h4>1 changed file:</h4>
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<a href="#9765bbdc8a4f2dfdddea193785c9cbcbe699d669">
darshan-runtime/darshan-gen-fortran.pl.in
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<h4>Changes:</h4>
<li id="9765bbdc8a4f2dfdddea193785c9cbcbe699d669">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/commit/fe91e0ff19a7721e64cc8546bc7fa77bab8e7bc7#9765bbdc8a4f2dfdddea193785c9cbcbe699d669"><strong>darshan-runtime/darshan-gen-fortran.pl.in</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -83,6 +83,7 @@ $FC_from_link=$1;</td>
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="perl"><span class="nv" style="color: #008080;">$link_cmd_prefix</span><span class="o" style="font-weight: 600;">=</span><span class="nv" style="color: #008080;">$2</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="perl"><span class="nv" style="color: #008080;">$base_link_cmd_suffix</span><span class="o" style="font-weight: 600;">=</span><span class="p">"</span><span class="se" style="color: #d14;">\"</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">$</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">{allargs</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">[</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">@</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">]</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">}</span><span class="se" style="color: #d14;">\"</span><span class="s2" style="color: #d14;"> $4</span><span class="p">";</span></span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="perl"><span class="nv" style="color: #008080;">$link_cmd_suffix</span><span class="o" style="font-weight: 600;">=</span><span class="p">"</span><span class="se" style="color: #d14;">\"</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">$</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">{newallargs</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">[</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">@</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">]</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">}</span><span class="se" style="color: #d14;">\"</span><span class="s2" style="color: #d14;"> </span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="si" style="color: #d14;">$FMPICH</span><span class="s2" style="color: #d14;"> `</span><span class="si" style="color: #d14;">$PREFIX</span><span class="s2" style="color: #d14;">/bin/darshan-config --pre-ld-flags` $4 `</span><span class="si" style="color: #d14;">$PREFIX</span><span class="s2" style="color: #d14;">/bin/darshan-config --post-ld-flags`</span><span class="p">";</span></span>
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="perl"><span class="nv" style="color: #008080;">$dyn_link_cmd_suffix</span><span class="o" style="font-weight: 600;">=</span><span class="p">"</span><span class="se" style="color: #d14;">\"</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">$</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">{newallargs</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">[</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">@</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">]</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="s2" style="color: #d14;">}</span><span class="se" style="color: #d14;">\"</span><span class="s2" style="color: #d14;"> </span><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span><span class="si" style="color: #d14;">$FMPICH</span><span class="s2" style="color: #d14;"> `</span><span class="si" style="color: #d14;">$PREFIX</span><span class="s2" style="color: #d14;">/bin/darshan-config --dyn-ld-flags` $4</span><span class="p">";</span></span>
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="perl"></span>
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="perl"><span class="c1" style="color: #998; font-style: italic;"># repeat the above step for the compilation command line</span></span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="perl"><span class="k" style="font-weight: 600;">if</span><span class="p">(</span><span class="o" style="font-weight: 600;">!</span><span class="p">(</span><span class="nv" style="color: #008080;">$compile_cmd</span> <span class="o" style="font-weight: 600;">=~</span> <span class="sr" style="color: #009926;">/(\S+)(.+)(-c foo.c)\s+(.*)/</span><span class="p">))</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -206,13 +207,6 @@ if [ "$linking" = yes ] ; then</td>
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<pre style="margin: 0;"> <span id="LC207" class="line" lang="perl"><span class="s" style="color: #d14;"> fi</span></span>
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="perl"><span class="s" style="color: #d14;">EOF</span></span>
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<pre style="margin: 0;"> <span id="LC209" class="line" lang="perl"><span class="k" style="font-weight: 600;">print</span> <span class="nv" style="color: #008080;">OUTPUT</span><span class="s" style="color: #d14;"><<"EOF";</span></span>
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<pre style="margin: 0;">-<span id="LC209" class="line" lang="perl"><span class="s" style="color: #d14;"> # Trial run to generate a symbol listing. We only enable Darshan if:</span></span>
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<pre style="margin: 0;">-<span id="LC210" class="line" lang="perl"><span class="s" style="color: #d14;"> # a) MPI is used</span></span>
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<pre style="margin: 0;">-<span id="LC211" class="line" lang="perl"><span class="s" style="color: #d14;"> # b) PMPI is _not_ used</span></span>
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<pre style="margin: 0;">-<span id="LC212" class="line" lang="perl"><span class="s" style="color: #d14;"> #</span></span>
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<pre style="margin: 0;">-<span id="LC213" class="line" lang="perl"><span class="s" style="color: #d14;"> # We want Darshan to get out of the way if the user is doing a runtime</span></span>
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<pre style="margin: 0;">-<span id="LC214" class="line" lang="perl"><span class="s" style="color: #d14;"> # test in configure (in which case MPI objects break the executable) or</span></span>
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<pre style="margin: 0;">-<span id="LC215" class="line" lang="perl"><span class="s" style="color: #d14;"> # if the user is using another PMPI based tool</span></span>
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216
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210
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="perl"></span>
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211
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<pre style="margin: 0;"> <span id="LC211" class="line" lang="perl"><span class="s" style="color: #d14;"> # if allargs includes any libraries, then we need to get </span></span>
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212
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<pre style="margin: 0;"> <span id="LC212" class="line" lang="perl"><span class="s" style="color: #d14;"> # -ldarshan in there first</span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -252,6 +246,14 @@ print OUTPUT<<"EOF";</td>
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252
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246
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<pre style="margin: 0;"> <span id="LC246" class="line" lang="perl"></span>
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253
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247
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<pre style="margin: 0;"> <span id="LC247" class="line" lang="perl"><span class="s" style="color: #d14;"> used_darshan=0</span></span>
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254
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<pre style="margin: 0;"> <span id="LC248" class="line" lang="perl"></span>
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249
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="perl"><span class="s" style="color: #d14;"> # Perform a test link before the real link. This allows us to check</span></span>
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250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="perl"><span class="s" style="color: #d14;"> # for two things:</span></span>
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251
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="perl"><span class="s" style="color: #d14;"> # 1) Are MPI symbols present? Technically Darshan should not harm</span></span>
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252
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="perl"><span class="s" style="color: #d14;"> # non-MPI programs, but it may bring in unwanted dependencies or</span></span>
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253
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="perl"><span class="s" style="color: #d14;"> # interfere with autoconf checks.</span></span>
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254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="perl"><span class="s" style="color: #d14;"> # 2) Is this link command line going to produce a static or dynamic</span></span>
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255
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="perl"><span class="s" style="color: #d14;"> # linked executable? We will adjust Darshan link strategy accordingly.</span></span>
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256
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="perl"></span>
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<pre style="margin: 0;"> <span id="LC257" class="line" lang="perl"><span class="s" style="color: #d14;"> # create a temporary file</span></span>
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<pre style="margin: 0;"> <span id="LC258" class="line" lang="perl"><span class="s" style="color: #d14;"> tmpfile=`mktemp`</span></span>
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<pre style="margin: 0;"> <span id="LC259" class="line" lang="perl"><span class="s" style="color: #d14;"> binfile=`mktemp`</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -271,10 +273,9 @@ print OUTPUT<<"EOF";</td>
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271
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<pre style="margin: 0;"> <span id="LC273" class="line" lang="perl"><span class="s" style="color: #d14;"> grep -i MPI \$tmpfile >& /dev/null</span></span>
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<pre style="margin: 0;"> <span id="LC274" class="line" lang="perl"><span class="s" style="color: #d14;"> rc_mpi=\$?</span></span>
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<pre style="margin: 0;"> <span id="LC275" class="line" lang="perl"></span>
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<pre style="margin: 0;">-<span id="LC274" class="line" lang="perl"><span class="s" style="color: #d14;"> # is PMPI being used for PMPI_File_open?</span></span>
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<pre style="margin: 0;">-<span id="LC275" class="line" lang="perl"><span class="s" style="color: #d14;"> grep -E PMPI_File_open \$tmpfile | grep -v -E \\(mpich.*\\.a\\) |grep \\(PMPI >& /dev/null</span></span>
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276
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<pre style="margin: 0;">-<span id="LC276" class="line" lang="perl"><span class="s" style="color: #d14;"> rc_pmpi=\$?</span></span>
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<pre style="margin: 0;">-<span id="LC277" class="line" lang="perl"></span>
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276
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<pre style="margin: 0;">+<span id="LC276" class="line" lang="perl"><span class="s" style="color: #d14;"> # did the link options produce a dynamic executable?</span></span>
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277
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<pre style="margin: 0;">+<span id="LC277" class="line" lang="perl"><span class="s" style="color: #d14;"> ldd \$binfile >& /dev/null</span></span>
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278
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<pre style="margin: 0;">+<span id="LC278" class="line" lang="perl"><span class="s" style="color: #d14;"> rc_dyn=\$?</span></span>
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278
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279
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<pre style="margin: 0;"> <span id="LC279" class="line" lang="perl"></span>
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279
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280
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<pre style="margin: 0;"> <span id="LC280" class="line" lang="perl"><span class="s" style="color: #d14;"> # find appropriate fortran library name for profiling</span></span>
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280
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281
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<pre style="margin: 0;"> <span id="LC281" class="line" lang="perl"><span class="s" style="color: #d14;"> grep -E libmpifort \$tmpfile >& /dev/null</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -298,27 +299,17 @@ print OUTPUT<<"EOF";</td>
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298
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299
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<pre style="margin: 0;"> <span id="LC299" class="line" lang="perl"><span class="s" style="color: #d14;"> fi</span></span>
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299
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300
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<pre style="margin: 0;"> <span id="LC300" class="line" lang="perl"></span>
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300
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301
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<pre style="margin: 0;"> <span id="LC301" class="line" lang="perl"><span class="s" style="color: #d14;"> rm \$tmpfile >& /dev/null</span></span>
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301
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<pre style="margin: 0;">-<span id="LC301" class="line" lang="perl"></span>
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302
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<pre style="margin: 0;">-<span id="LC302" class="line" lang="perl"><span class="s" style="color: #d14;"> # is MPI_Init a weak symbol?</span></span>
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303
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<pre style="margin: 0;">-<span id="LC303" class="line" lang="perl"><span class="s" style="color: #d14;"> # disable darshan if it is not</span></span>
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304
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<pre style="margin: 0;">-<span id="LC304" class="line" lang="perl"><span class="s" style="color: #d14;"> if [ -e \$binfile ];</span></span>
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305
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<pre style="margin: 0;">-<span id="LC305" class="line" lang="perl"><span class="s" style="color: #d14;"> then</span></span>
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306
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<pre style="margin: 0;">-<span id="LC306" class="line" lang="perl"><span class="s" style="color: #d14;"> nm \$binfile | grep -i "mpi_init" | grep -i "w" >& /dev/null</span></span>
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307
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<pre style="margin: 0;">-<span id="LC307" class="line" lang="perl"><span class="s" style="color: #d14;"> rc_weak=\$?</span></span>
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308
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<pre style="margin: 0;">-<span id="LC308" class="line" lang="perl"><span class="s" style="color: #d14;"> else</span></span>
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309
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<pre style="margin: 0;">-<span id="LC309" class="line" lang="perl"><span class="s" style="color: #d14;"> rc_weak=1</span></span>
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310
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<pre style="margin: 0;">-<span id="LC310" class="line" lang="perl"><span class="s" style="color: #d14;"> fi</span></span>
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311
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<pre style="margin: 0;"> <span id="LC302" class="line" lang="perl"><span class="s" style="color: #d14;"> rm \$binfile >& /dev/null</span></span>
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312
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303
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<pre style="margin: 0;"> <span id="LC303" class="line" lang="perl"></span>
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313
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<pre style="margin: 0;">-<span id="LC313" class="line" lang="perl"><span class="s" style="color: #d14;"> # disable darshan if the executable is not an MPI program <span class="idiff left right">(this featur</span>e</span></span>
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314
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<pre style="margin: 0;">-<span id="LC314" class="line" lang="perl"><span class="s" style="color: #d14;"> # <span class="idiff left right">mainly allows runtime configure tests to work</span></span></span>
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315
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<pre style="margin: 0;">-<span id="LC315" class="line" lang="perl"><span class="s" style="color: #d14;"> if [ \$rc_mpi -eq 0 ] ; then</span></span>
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316
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<pre style="margin: 0;">-<span id="LC316" class="line" lang="perl"><span class="s" style="color: #d14;"> <span class="idiff left right"># disable darshan if something else is already using PMPI; we don't</span></span></span>
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<td class="diff-line-num old old_line" data-linenumber="317" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
317
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<pre style="margin: 0;">-<span id="LC317" class="line" lang="perl"><span class="s" style="color: #d14;"> <span class="idiff left right"># want to cause any symbol conflicts</span></span></span>
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<td class="diff-line-num old old_line" data-linenumber="318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
318
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<pre style="margin: 0;">-<span id="LC318" class="line" lang="perl"><span class="s" style="color: #d14;"> <span class="idiff left right">if [ \$rc_pmpi -ne 0 ] && [ \$compiler_check -eq 0 ] && [ \$rc_weak -eq 0 ]; then</span></span></span>
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304
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<pre style="margin: 0;">+<span id="LC304" class="line" lang="perl"><span class="s" style="color: #d14;"> # disable darshan if the executable is not an MPI program <span class="idiff left right">or we'v</span>e</span></span>
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305
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<pre style="margin: 0;">+<span id="LC305" class="line" lang="perl"><span class="s" style="color: #d14;"> # <span class="idiff left right">detected an incompatible compiler</span></span></span>
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306
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<pre style="margin: 0;">+<span id="LC306" class="line" lang="perl"><span class="s" style="color: #d14;"> if [ \$rc_mpi -eq 0 ] <span class="idiff left right">&& [ \$compiler_check -eq 0 ]</span>; then</span></span>
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307
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<pre style="margin: 0;">+<span id="LC307" class="line" lang="perl"><span class="s" style="color: #d14;"> <span class="idiff left right">if [ \$rc_dyn -eq 0 ]; then</span></span></span>
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308
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<pre style="margin: 0;">+<span id="LC308" class="line" lang="perl"><span class="s" style="color: #d14;"> <span class="idiff left right"> \$Show \$FC $link_cmd_prefix $dyn_link_cmd_suffix</span></span></span>
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309
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<pre style="margin: 0;">+<span id="LC309" class="line" lang="perl"><span class="s" style="color: #d14;"> <span class="idiff left right">else</span></span></span>
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319
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<pre style="margin: 0;"> <span id="LC310" class="line" lang="perl"><span class="s" style="color: #d14;"> \$Show \$FC $link_cmd_prefix $link_cmd_suffix</span></span>
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320
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<pre style="margin: 0;">-<span id="LC320" class="line" lang="perl"><span class="s" style="color: #d14;"> used_darshan=1</span></span>
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321
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<pre style="margin: 0;"> <span id="LC311" class="line" lang="perl"><span class="s" style="color: #d14;"> fi</span></span>
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312
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<pre style="margin: 0;">+<span id="LC312" class="line" lang="perl"><span class="s" style="color: #d14;"> used_darshan=1</span></span>
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322
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<pre style="margin: 0;"> <span id="LC313" class="line" lang="perl"><span class="s" style="color: #d14;"> fi</span></span>
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323
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<pre style="margin: 0;"> <span id="LC314" class="line" lang="perl"></span>
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324
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<pre style="margin: 0;"> <span id="LC315" class="line" lang="perl"><span class="s" style="color: #d14;"> # otherwise use the normal command line</span></span>
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