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<h3>
Philip Carns pushed to branch issue-223-mmap-hugepages
at <a href="https://xgitlab.cels.anl.gov/darshan/darshan">darshan / darshan</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/commit/dbbfe1356b25d37f28890868caa2af96e6333c88">dbbfe135</a></strong>
<div>
<span>by Shane Snyder</span>
<i>at 2017-01-31T09:59:13-06:00</i>
</div>
<pre class="commit-message" style="margin: 0; white-space: pre-wrap">update runtime docs with dxt info
</pre>
</li>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/commit/8821f33d86d98a294a113cccc33e7aab48fafb8c">8821f33d</a></strong>
<div>
<span>by Shane Snyder</span>
<i>at 2017-01-31T10:00:17-06:00</i>
</div>
<pre class="commit-message" style="margin: 0; white-space: pre-wrap">ENABLE_DXT_IO_TRACE_MEM => DXT_ENABLE_IO_TRACE
</pre>
</li>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/commit/36e039ff2945f9574898bf6404cbda74b50d4087">36e039ff</a></strong>
<div>
<span>by Shane Snyder</span>
<i>at 2017-01-31T11:42:49-06:00</i>
</div>
<pre class="commit-message" style="margin: 0; white-space: pre-wrap">change DXT module names
</pre>
</li>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/commit/6dd6e0ab9893467bea51f8393bc39361c3932036">6dd6e0ab</a></strong>
<div>
<span>by Shane Snyder</span>
<i>at 2017-01-31T11:43:03-06:00</i>
</div>
<pre class="commit-message" style="margin: 0; white-space: pre-wrap">update darshan-util docs to describe DxT
</pre>
</li>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/commit/cdce70c9043c69fd0d87701b1a9a1bd261529a87">cdce70c9</a></strong>
<div>
<span>by Shane Snyder</span>
<i>at 2017-01-31T12:10:08-06:00</i>
</div>
<pre class="commit-message" style="margin: 0; white-space: pre-wrap">updated ChangeLog for all 3.1.3-pre contributions
</pre>
</li>
<li>
<strong><a href="https://xgitlab.cels.anl.gov/darshan/darshan/commit/f8cfb07e7874fe885d05122eb1127e38ca41b08a">f8cfb07e</a></strong>
<div>
<span>by Shane Snyder</span>
<i>at 2017-01-31T12:12:11-06:00</i>
</div>
<pre class="commit-message" style="margin: 0; white-space: pre-wrap">bump up configure version numbers
</pre>
</li>
</ul>
<h4>11 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#00fe7828d56d7a3ee4030d6cea057cf13f50e70c" style="text-decoration: none">
ChangeLog
</a>
</li>
<li class="file-stats">
<a href="#bdd1e6b6875870a7af48c6ae7da880f3b8c1f3bb" style="text-decoration: none">
darshan-log-format.h
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<li class="file-stats">
<a href="#fd68d1e1ce6723281126e7dd4196d7ab72adcc5d" style="text-decoration: none">
darshan-runtime/configure
</a>
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<li class="file-stats">
<a href="#d568bf870ab3f1dae63146414b75cf9481a73076" style="text-decoration: none">
darshan-runtime/configure.in
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</li>
<li class="file-stats">
<a href="#c1f1275094e9957965ea40cf5852335b4164fd05" style="text-decoration: none">
darshan-runtime/doc/darshan-runtime.txt
</a>
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<li class="file-stats">
<a href="#6c99232e319f8703be3efb4ca0398259a2b1f8f5" style="text-decoration: none">
darshan-runtime/lib/darshan-dxt.c
</a>
</li>
<li class="file-stats">
<a href="#877f1651aa0eb0d9a867254560698309a8f666df" style="text-decoration: none">
darshan-runtime/lib/darshan-mpiio.c
</a>
</li>
<li class="file-stats">
<a href="#62d3c9bc6d4515bfe5c262ecb56de42ca32bc03c" style="text-decoration: none">
darshan-runtime/lib/darshan-posix.c
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</li>
<li class="file-stats">
<a href="#23911c491be8fa8cb7a78ffa8fcd89f582b778c8" style="text-decoration: none">
darshan-util/configure
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</li>
<li class="file-stats">
<a href="#a9f557d482eaf058064eaed649f266799512281e" style="text-decoration: none">
darshan-util/configure.in
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</li>
<li class="file-stats">
<a href="#00fda3684246660c53077955f537d75b3aa90000" style="text-decoration: none">
darshan-util/doc/darshan-util.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="00fe7828d56d7a3ee4030d6cea057cf13f50e70c">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#00fe7828d56d7a3ee4030d6cea057cf13f50e70c"><strong>ChangeLog</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="4" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -4,6 +4,16 @@ Darshan Release Change Log</td>
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<td class="diff-line-num old_line" data-linenumber="4" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="4" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em">
<pre style="margin: 0"> <span id="LC4" class="line"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="5" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="5" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em">
<pre style="margin: 0"> <span id="LC5" class="line">Darshan-3.1.3-pre1</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="6" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="6" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em">
<pre style="margin: 0"> <span id="LC6" class="line">=============</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="7" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="7" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC7" class="line">* add new DxT instrumentation modules to provide fine-grained read/write</span>
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<td class="diff-line-num new old_line" data-linenumber="7" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="8" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC8" class="line"> operation tracing at both the POSIX and MPI-IO layers</span>
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<td class="diff-line-num new old_line" data-linenumber="7" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="9" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC9" class="line"> - this functionality should be enabled at runtime by exporting the</span>
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<td class="diff-line-num new new_line" data-linenumber="10" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC10" class="line"> DXT_ENABLE_IO_TRACE environment variable</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="11" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC11" class="line"> - trace output is stored within Darshan's traditional log file format</span>
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<td class="diff-line-num new new_line" data-linenumber="12" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC12" class="line"> - a corresponding trace parser (darshan-dxt-parser) is offered within</span>
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<td class="diff-line-num new new_line" data-linenumber="13" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC13" class="line"> darshan-util to allow the DxT trace modules to be parsed and displayed</span>
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<td class="diff-line-num new new_line" data-linenumber="14" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC14" class="line"> - this software was contributed by Cong Xu and Intel's HPDD division.a</span>
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<td class="diff-line-num new new_line" data-linenumber="15" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC15" class="line">* add logic to allow Darshan to capture command line arguments from Fortran</span>
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<td class="diff-line-num new new_line" data-linenumber="16" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0">+<span id="LC16" class="line"> applications (contributed by Cristian Simarro)</span>
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<td class="diff-line-num new_line" data-linenumber="17" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
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<pre style="margin: 0"> <span id="LC17" class="line">* skip instrumentation attempts for anonymous mmap() calls; this avoids a</span>
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<td class="diff-line-num new_line" data-linenumber="18" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
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<pre style="margin: 0"> <span id="LC18" class="line"> potentential deadlock condition when used with hugepages on Cray systems.</span>
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<pre style="margin: 0"> <span id="LC19" class="line"> Reported by Glenn Lockwood and Cristian Simarro.</span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="25" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -15,6 +25,10 @@ Darshan-3.1.3-pre1</td>
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15
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25
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<pre style="margin: 0"> <span id="LC25" class="line"> vary the wrapper prototypes to match the corresponding HDF5 library ABI.</span>
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16
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26
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<pre style="margin: 0"> <span id="LC26" class="line"> The initial patch for HDF5 1.10 compatibility was contributed by </span>
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17
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27
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<pre style="margin: 0"> <span id="LC27" class="line"> Karl-Ulrich Bamberg.</span>
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<td class="diff-line-num new new_line" data-linenumber="28" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
28
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<pre style="margin: 0">+<span id="LC28" class="line">* modified Darshan's path exclusion logic to include a whitelist to prevent</span>
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29
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<pre style="margin: 0">+<span id="LC29" class="line"> I/O to/from Cray's Datawarp service from being filtered out (it is located</span>
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30
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<pre style="margin: 0">+<span id="LC30" class="line"> within the /var directory, which historically has been excluded). Reported</span>
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31
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<pre style="margin: 0">+<span id="LC31" class="line"> by Glenn Lockwood.</span>
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18
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32
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<pre style="margin: 0"> <span id="LC32" class="line"></span>
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19
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33
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<pre style="margin: 0"> <span id="LC33" class="line">Darshan-3.1.2</span>
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20
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34
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<pre style="margin: 0"> <span id="LC34" class="line">=============</span>
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<li id="bdd1e6b6875870a7af48c6ae7da880f3b8c1f3bb">
<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#bdd1e6b6875870a7af48c6ae7da880f3b8c1f3bb"><strong>darshan-log-format.h</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="140" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -140,8 +140,8 @@ struct darshan_base_record</td>
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<td class="diff-line-num old_line" data-linenumber="140" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
140
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<pre style="margin: 0"> <span id="LC140" class="line"><span class="cp" style="color: #999; font-weight: bold"> X(DARSHAN_LUSTRE_MOD, "LUSTRE", DARSHAN_LUSTRE_VER, &lustre_logutils) \</span></span>
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<td class="diff-line-num old_line" data-linenumber="141" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">
141
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141
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<pre style="margin: 0"> <span id="LC141" class="line"><span class="cp" style="color: #999; font-weight: bold"> X(DARSHAN_STDIO_MOD, "STDIO", DARSHAN_STDIO_VER, &stdio_logutils) \</span></span>
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142
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142
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<pre style="margin: 0"> <span id="LC142" class="line"><span class="cp" style="color: #999; font-weight: bold"> </span><span class="cm" style="color: #998; font-style: italic">/* DXT */</span><span class="cp" style="color: #999; font-weight: bold"> \</span></span>
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143
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<pre style="margin: 0">-<span id="LC143" class="line"><span class="cp" style="color: #999; font-weight: bold"> X(DXT_POSIX_MOD, "<span class="idiff left right">X</span>_POSIX", DXT_POSIX_VER, &dxt_posix_logutils) \</span></span>
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144
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<pre style="margin: 0">-<span id="LC144" class="line"><span class="cp" style="color: #999; font-weight: bold"> X(DXT_MPIIO_MOD, "<span class="idiff left right">X</span>_MPIIO", DXT_MPIIO_VER, &dxt_mpiio_logutils)</span></span>
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143
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<pre style="margin: 0">+<span id="LC143" class="line"><span class="cp" style="color: #999; font-weight: bold"> X(DXT_POSIX_MOD, "<span class="idiff left right">DXT</span>_POSIX", DXT_POSIX_VER, &dxt_posix_logutils) \</span></span>
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144
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<pre style="margin: 0">+<span id="LC144" class="line"><span class="cp" style="color: #999; font-weight: bold"> X(DXT_MPIIO_MOD, "<span class="idiff left right">DXT</span>_MPIIO", DXT_MPIIO_VER, &dxt_mpiio_logutils)</span></span>
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145
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145
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<pre style="margin: 0"> <span id="LC145" class="line"></span>
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146
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<pre style="margin: 0"> <span id="LC146" class="line"><span class="cm" style="color: #998; font-style: italic">/* unique identifiers to distinguish between available darshan modules */</span></span>
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147
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147
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<pre style="margin: 0"> <span id="LC147" class="line"><span class="cm" style="color: #998; font-style: italic">/* NOTES: - valid ids range from [0...DARSHAN_MAX_MODS-1]</span></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#fd68d1e1ce6723281126e7dd4196d7ab72adcc5d"><strong>darshan-runtime/configure</strong></a>
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<pre style="margin: 0"> <span id="LC1" class="line"><span class="c" style="color: #998; font-style: italic">#! /bin/sh</span></span>
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<pre style="margin: 0"> <span id="LC2" class="line"><span class="c" style="color: #998; font-style: italic"># Guess values for system-dependent variables and create Makefiles.</span></span>
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<pre style="margin: 0">-<span id="LC3" class="line"><span class="c" style="color: #998; font-style: italic"># Generated by GNU Autoconf 2.69 for darshan-runtime 3.1.<span class="idiff left right">2</span>.</span></span>
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<pre style="margin: 0">+<span id="LC3" class="line"><span class="c" style="color: #998; font-style: italic"># Generated by GNU Autoconf 2.69 for darshan-runtime 3.1.<span class="idiff left right">3-pre1</span>.</span></span>
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4
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<pre style="margin: 0"> <span id="LC4" class="line"><span class="c" style="color: #998; font-style: italic">#</span></span>
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5
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5
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<pre style="margin: 0"> <span id="LC5" class="line"><span class="c" style="color: #998; font-style: italic">#</span></span>
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6
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<pre style="margin: 0"> <span id="LC6" class="line"><span class="c" style="color: #998; font-style: italic"># Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc.</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="577" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="577" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -577,8 +577,8 @@ MAKEFLAGS=</td>
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577
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577
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<pre style="margin: 0"> <span id="LC577" class="line"><span class="c" style="color: #998; font-style: italic"># Identity of this package.</span></span>
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578
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<pre style="margin: 0"> <span id="LC578" class="line"><span class="nv" style="color: teal">PACKAGE_NAME</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'darshan-runtime'</span></span>
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579
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579
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<pre style="margin: 0"> <span id="LC579" class="line"><span class="nv" style="color: teal">PACKAGE_TARNAME</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'darshan-runtime'</span></span>
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<pre style="margin: 0">-<span id="LC580" class="line"><span class="nv" style="color: teal">PACKAGE_VERSION</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'3.1.<span class="idiff left right">2</span>'</span></span>
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581
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<pre style="margin: 0">-<span id="LC581" class="line"><span class="nv" style="color: teal">PACKAGE_STRING</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'darshan-runtime 3.1.<span class="idiff left right">2</span>'</span></span>
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580
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<pre style="margin: 0">+<span id="LC580" class="line"><span class="nv" style="color: teal">PACKAGE_VERSION</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'3.1.<span class="idiff left right">3-pre1</span>'</span></span>
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<pre style="margin: 0">+<span id="LC581" class="line"><span class="nv" style="color: teal">PACKAGE_STRING</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'darshan-runtime 3.1.<span class="idiff left right">3-pre1</span>'</span></span>
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<pre style="margin: 0"> <span id="LC582" class="line"><span class="nv" style="color: teal">PACKAGE_BUGREPORT</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">''</span></span>
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583
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583
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<pre style="margin: 0"> <span id="LC583" class="line"><span class="nv" style="color: teal">PACKAGE_URL</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">''</span></span>
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584
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584
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<pre style="margin: 0"> <span id="LC584" class="line"></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -1263,7 +1263,7 @@ if test "$ac_init_help" = "long"; then</td>
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1263
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1263
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<pre style="margin: 0"> <span id="LC1263" class="line"> <span class="c" style="color: #998; font-style: italic"># Omit some internal or obsolete options to make the list less imposing.</span></span>
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1264
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<pre style="margin: 0"> <span id="LC1264" class="line"> <span class="c" style="color: #998; font-style: italic"># This message is too long to be a string in the A/UX 3.1 sh.</span></span>
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<pre style="margin: 0"> <span id="LC1265" class="line"> cat <span class="sh" style="color: #d14"><<_ACEOF</span></span>
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<pre style="margin: 0">-<span id="LC1266" class="line"><span class="sh" style="color: #d14">\`configure' configures darshan-runtime 3.1.<span class="idiff left right">2</span> to adapt to many kinds of systems.</span></span>
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<pre style="margin: 0">+<span id="LC1266" class="line"><span class="sh" style="color: #d14">\`configure' configures darshan-runtime 3.1.<span class="idiff left right">3-pre1</span> to adapt to many kinds of systems.</span></span>
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<pre style="margin: 0"> <span id="LC1268" class="line"><span class="sh" style="color: #d14">Usage: $0 [OPTION]... [VAR=VALUE]...</span></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -1325,7 +1325,7 @@ fi</td>
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<pre style="margin: 0"> <span id="LC1325" class="line"></span>
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<pre style="margin: 0"> <span id="LC1326" class="line"><span class="k" style="font-weight: bold">if </span><span class="nb" style="color: #0086b3">test</span> -n <span class="s2" style="color: #d14">"</span><span class="nv" style="color: teal">$ac_init_help</span><span class="s2" style="color: #d14">"</span>; <span class="k" style="font-weight: bold">then</span></span>
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1327
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<pre style="margin: 0"> <span id="LC1327" class="line"><span class="k" style="font-weight: bold"> case</span> <span class="nv" style="color: teal">$ac_init_help</span> <span class="k" style="font-weight: bold">in</span></span>
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1328
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<pre style="margin: 0">-<span id="LC1328" class="line"><span class="k" style="font-weight: bold"> </span>short <span class="p">|</span> recursive <span class="p">)</span> <span class="nb" style="color: #0086b3">echo</span> <span class="s2" style="color: #d14">"Configuration of darshan-runtime 3.1.<span class="idiff left right">2</span>:"</span><span class="p">;;</span></span>
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<pre style="margin: 0">+<span id="LC1328" class="line"><span class="k" style="font-weight: bold"> </span>short <span class="p">|</span> recursive <span class="p">)</span> <span class="nb" style="color: #0086b3">echo</span> <span class="s2" style="color: #d14">"Configuration of darshan-runtime 3.1.<span class="idiff left right">3-pre1</span>:"</span><span class="p">;;</span></span>
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<pre style="margin: 0"> <span id="LC1329" class="line"> <span class="k" style="font-weight: bold">esac</span></span>
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1330
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<pre style="margin: 0"> <span id="LC1330" class="line"> cat <span class="sh" style="color: #d14"><<\_ACEOF</span></span>
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<pre style="margin: 0"> <span id="LC1331" class="line"></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -1439,7 +1439,7 @@ fi</td>
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1439
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<pre style="margin: 0"> <span id="LC1439" class="line"><span class="nb" style="color: #0086b3">test</span> -n <span class="s2" style="color: #d14">"</span><span class="nv" style="color: teal">$ac_init_help</span><span class="s2" style="color: #d14">"</span> <span class="o" style="font-weight: bold">&&</span> <span class="nb" style="color: #0086b3">exit</span> <span class="nv" style="color: teal">$ac_status</span></span>
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1440
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<pre style="margin: 0"> <span id="LC1440" class="line"><span class="k" style="font-weight: bold">if</span> <span class="nv" style="color: teal">$ac_init_version</span>; <span class="k" style="font-weight: bold">then</span></span>
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<pre style="margin: 0"> <span id="LC1441" class="line"><span class="k" style="font-weight: bold"> </span>cat <span class="sh" style="color: #d14"><<\_ACEOF</span></span>
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<pre style="margin: 0">-<span id="LC1442" class="line"><span class="sh" style="color: #d14">darshan-runtime configure 3.1.<span class="idiff left right">2</span></span></span>
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<pre style="margin: 0">+<span id="LC1442" class="line"><span class="sh" style="color: #d14">darshan-runtime configure 3.1.<span class="idiff left right">3-pre1</span></span></span>
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<pre style="margin: 0"> <span id="LC1443" class="line"><span class="sh" style="color: #d14">generated by GNU Autoconf 2.69</span></span>
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<pre style="margin: 0"> <span id="LC1445" class="line"><span class="sh" style="color: #d14">Copyright (C) 2012 Free Software Foundation, Inc.</span></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -1791,7 +1791,7 @@ cat >config.log <<_ACEOF</td>
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<pre style="margin: 0"> <span id="LC1791" class="line"><span class="sh" style="color: #d14">This file contains any messages produced by compilers while</span></span>
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<pre style="margin: 0"> <span id="LC1792" class="line"><span class="sh" style="color: #d14">running configure, to aid debugging if configure makes a mistake.</span></span>
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<pre style="margin: 0">-<span id="LC1794" class="line"><span class="sh" style="color: #d14">It was created by darshan-runtime $as_me 3.1.<span class="idiff left right">2</span>, which was</span></span>
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<pre style="margin: 0">+<span id="LC1794" class="line"><span class="sh" style="color: #d14">It was created by darshan-runtime $as_me 3.1.<span class="idiff left right">3-pre1</span>, which was</span></span>
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<pre style="margin: 0"> <span id="LC1795" class="line"><span class="sh" style="color: #d14">generated by GNU Autoconf 2.69. Invocation command line was</span></span>
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<pre style="margin: 0"> <span id="LC1796" class="line"></span>
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<pre style="margin: 0"> <span id="LC1797" class="line"><span class="sh" style="color: #d14"> $ $0 $@</span></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -4400,7 +4400,7 @@ else</td>
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<pre style="margin: 0"> <span id="LC4400" class="line"><span class="k" style="font-weight: bold"> </span><span class="nv" style="color: teal">MPICH_LIB_OLD</span><span class="o" style="font-weight: bold">=</span>0</span>
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<pre style="margin: 0"> <span id="LC4401" class="line"><span class="k" style="font-weight: bold">fi</span></span>
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<pre style="margin: 0"> <span id="LC4402" class="line"></span>
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<pre style="margin: 0">-<span id="LC4403" class="line"><span class="nv" style="color: teal">DARSHAN_VERSION</span><span class="o" style="font-weight: bold">=</span><span class="s2" style="color: #d14">"3.1.<span class="idiff left right">2</span>"</span></span>
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<pre style="margin: 0">+<span id="LC4403" class="line"><span class="nv" style="color: teal">DARSHAN_VERSION</span><span class="o" style="font-weight: bold">=</span><span class="s2" style="color: #d14">"3.1.<span class="idiff left right">3-pre1</span>"</span></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -4922,7 +4922,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1</td>
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<pre style="margin: 0"> <span id="LC4922" class="line"><span class="sh" style="color: #d14"># report actual input values of CONFIG_FILES etc. instead of their</span></span>
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<pre style="margin: 0"> <span id="LC4923" class="line"><span class="sh" style="color: #d14"># values after options handling.</span></span>
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<pre style="margin: 0"> <span id="LC4924" class="line"><span class="sh" style="color: #d14">ac_log="</span></span>
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<pre style="margin: 0">-<span id="LC4925" class="line"><span class="sh" style="color: #d14">This file was extended by darshan-runtime $as_me 3.1.<span class="idiff left right">2</span>, which was</span></span>
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<pre style="margin: 0">+<span id="LC4925" class="line"><span class="sh" style="color: #d14">This file was extended by darshan-runtime $as_me 3.1.<span class="idiff left right">3-pre1</span>, which was</span></span>
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<pre style="margin: 0"> <span id="LC4926" class="line"><span class="sh" style="color: #d14">generated by GNU Autoconf 2.69. Invocation command line was</span></span>
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<pre style="margin: 0"> <span id="LC4927" class="line"></span>
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<pre style="margin: 0"> <span id="LC4928" class="line"><span class="sh" style="color: #d14"> CONFIG_FILES = $CONFIG_FILES</span></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -4984,7 +4984,7 @@ _ACEOF</td>
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<pre style="margin: 0"> <span id="LC4984" class="line">cat >><span class="nv" style="color: teal">$CONFIG_STATUS</span> <span class="sh" style="color: #d14"><<_ACEOF || ac_write_fail=1</span></span>
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<pre style="margin: 0"> <span id="LC4985" class="line"><span class="sh" style="color: #d14">ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"</span></span>
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<pre style="margin: 0"> <span id="LC4986" class="line"><span class="sh" style="color: #d14">ac_cs_version="\\</span></span>
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<pre style="margin: 0">-<span id="LC4987" class="line"><span class="sh" style="color: #d14">darshan-runtime config.status 3.1.<span class="idiff left right">2</span></span></span>
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<pre style="margin: 0">+<span id="LC4987" class="line"><span class="sh" style="color: #d14">darshan-runtime config.status 3.1.<span class="idiff left right">3-pre1</span></span></span>
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<pre style="margin: 0"> <span id="LC4988" class="line"><span class="sh" style="color: #d14">configured by $0, generated by GNU Autoconf 2.69,</span></span>
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<pre style="margin: 0"> <span id="LC4989" class="line"><span class="sh" style="color: #d14"> with options \\"\$ac_cs_config\\"</span></span>
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<pre style="margin: 0"> <span id="LC4990" class="line"></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#d568bf870ab3f1dae63146414b75cf9481a73076"><strong>darshan-runtime/configure.in</strong></a>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -5,7 +5,7 @@ dnl Process this file with autoconf to produce a configure script.</td>
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<pre style="margin: 0"> <span id="LC5" class="line">dnl You may need to use autoheader as well if changing any DEFINEs</span>
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<pre style="margin: 0"> <span id="LC6" class="line"></span>
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<pre style="margin: 0"> <span id="LC7" class="line">dnl sanity checks, output header, location of scripts used here</span>
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<pre style="margin: 0">-<span id="LC8" class="line">AC_INIT([darshan-runtime], [3.1.<span class="idiff left right">2</span>])</span>
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<pre style="margin: 0">+<span id="LC8" class="line">AC_INIT([darshan-runtime], [3.1.<span class="idiff left right">3-pre1</span>])</span>
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<pre style="margin: 0"> <span id="LC9" class="line">AC_CONFIG_SRCDIR([darshan.h])</span>
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<pre style="margin: 0"> <span id="LC10" class="line">AC_CONFIG_AUX_DIR(../maint/config)</span>
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<pre style="margin: 0"> <span id="LC11" class="line">AC_CONFIG_HEADER(darshan-runtime-config.h)</span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#c1f1275094e9957965ea40cf5852335b4164fd05"><strong>darshan-runtime/doc/darshan-runtime.txt</strong></a>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -25,6 +25,13 @@ for jobs running on BG/Q systems, a module for gathering Lustre striping data fo</td>
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<pre style="margin: 0"> <span id="LC25" class="line">files on Lustre file systems, and a module for instrumenting stdio (i.e., stream I/O</span>
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<pre style="margin: 0"> <span id="LC26" class="line">functions like `fopen()`, `fread()`, etc).</span>
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<pre style="margin: 0"> <span id="LC27" class="line"></span>
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<pre style="margin: 0">+<span id="LC28" class="line">Starting in version 3.1.3, Darshan also allows for full tracing of application I/O</span>
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<pre style="margin: 0">+<span id="LC29" class="line">workloads using the newly developed Darshan eXtended Tracing (DXT) instrumentation</span>
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<pre style="margin: 0">+<span id="LC30" class="line">module. This module can be selectively enabled at runtime to provide high-fidelity</span>
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<pre style="margin: 0">+<span id="LC31" class="line">traces of an application's I/O workload, as opposed to the coarse-grained I/O summary</span>
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<pre style="margin: 0">+<span id="LC32" class="line">data that Darshan has traditionally provided. Currently, DXT only traces at the POSIX</span>
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<pre style="margin: 0">+<span id="LC33" class="line">and MPI-IO layers.</span>
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<pre style="margin: 0">+<span id="LC34" class="line"></span>
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<pre style="margin: 0"> <span id="LC35" class="line">This document provides generic installation instructions, but "recipes" for</span>
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<pre style="margin: 0"> <span id="LC36" class="line">several common HPC systems are provided at the end of the document as well.</span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -546,6 +553,7 @@ behavior at runtime:</td>
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<pre style="margin: 0"> <span id="LC553" class="line">* DARSHAN_LOGFILE: specifies the path (directory + Darshan log file name) to write the output Darshan log to. This overrides the default Darshan behavior of automatically generating a log file name and adding it to a log file directory formatted using darshan-mk-log-dirs script.</span>
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<pre style="margin: 0"> <span id="LC554" class="line">* DARSHAN_MODMEM: specifies the maximum amount of memory (in MiB) Darshan instrumentation modules can collectively consume at runtime (if not specified, Darshan uses a default quota of 2 MiB).</span>
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<pre style="margin: 0"> <span id="LC555" class="line">* DARSHAN_MMAP_LOGPATH: if Darshan's mmap log file mechanism is enabled, this variable specifies what path the mmap log files should be stored in (if not specified, log files will be stored in `/tmp`).</span>
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<pre style="margin: 0">+<span id="LC556" class="line">* DXT_ENABLE_IO_TRACE: setting this environment variable enables the DXT (Darshan eXtended Tracing) modules at runtime. Users can specify a numeric value for this variable to set the number of MiB to use for tracing per process; if no value is specified, Darshan will use a default value of 4 MiB.</span>
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<pre style="margin: 0"> <span id="LC557" class="line"></span>
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<pre style="margin: 0"> <span id="LC558" class="line">== Debugging</span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#6c99232e319f8703be3efb4ca0398259a2b1f8f5"><strong>darshan-runtime/lib/darshan-dxt.c</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="410" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="410" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -410,7 +410,7 @@ static void dxt_posix_runtime_initialize()</td>
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<pre style="margin: 0"> <span id="LC410" class="line"> <span class="n" style="color: #333">memset</span><span class="p">(</span><span class="n" style="color: #333">dxt_posix_runtime</span><span class="p">,</span> <span class="mi" style="color: #099">0</span><span class="p">,</span> <span class="k" style="font-weight: bold">sizeof</span><span class="p">(</span><span class="o" style="font-weight: bold">*</span><span class="n" style="color: #333">dxt_posix_runtime</span><span class="p">));</span></span>
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411
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411
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<pre style="margin: 0"> <span id="LC411" class="line"></span>
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412
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<pre style="margin: 0"> <span id="LC412" class="line"> <span class="cm" style="color: #998; font-style: italic">/* set the memory quota for DXT, if it has not been initialized */</span></span>
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413
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<pre style="margin: 0">-<span id="LC413" class="line"> <span class="n" style="color: #333">envstr</span> <span class="o" style="font-weight: bold">=</span> <span class="n" style="color: #333">getenv</span><span class="p">(</span><span class="s" style="color: #d14">"<span class="idiff left right">ENABLE_DXT_IO_TRACE_MEM</span>"</span><span class="p">);</span></span>
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<pre style="margin: 0">+<span id="LC413" class="line"> <span class="n" style="color: #333">envstr</span> <span class="o" style="font-weight: bold">=</span> <span class="n" style="color: #333">getenv</span><span class="p">(</span><span class="s" style="color: #d14">"<span class="idiff left right">DXT_ENABLE_IO_TRACE</span>"</span><span class="p">);</span></span>
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414
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<pre style="margin: 0"> <span id="LC414" class="line"> <span class="k" style="font-weight: bold">if</span><span class="p">(</span><span class="n" style="color: #333">envstr</span> <span class="o" style="font-weight: bold">&&</span> <span class="n" style="color: #333">dxt_mpiio_runtime</span> <span class="o" style="font-weight: bold">==</span> <span class="nb" style="color: #0086b3">NULL</span><span class="p">)</span></span>
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415
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<pre style="margin: 0"> <span id="LC415" class="line"> <span class="p">{</span></span>
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416
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<pre style="margin: 0"> <span id="LC416" class="line"> <span class="n" style="color: #333">ret</span> <span class="o" style="font-weight: bold">=</span> <span class="n" style="color: #333">sscanf</span><span class="p">(</span><span class="n" style="color: #333">envstr</span><span class="p">,</span> <span class="s" style="color: #d14">"%lf"</span><span class="p">,</span> <span class="o" style="font-weight: bold">&</span><span class="n" style="color: #333">tmpfloat</span><span class="p">);</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="463" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="463" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -463,7 +463,7 @@ void dxt_mpiio_runtime_initialize()</td>
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463
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463
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<pre style="margin: 0"> <span id="LC463" class="line"> <span class="n" style="color: #333">memset</span><span class="p">(</span><span class="n" style="color: #333">dxt_mpiio_runtime</span><span class="p">,</span> <span class="mi" style="color: #099">0</span><span class="p">,</span> <span class="k" style="font-weight: bold">sizeof</span><span class="p">(</span><span class="o" style="font-weight: bold">*</span><span class="n" style="color: #333">dxt_mpiio_runtime</span><span class="p">));</span></span>
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464
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<pre style="margin: 0"> <span id="LC464" class="line"></span>
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465
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<pre style="margin: 0"> <span id="LC465" class="line"> <span class="cm" style="color: #998; font-style: italic">/* set the memory quota for DXT, if it has not been initialized */</span></span>
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<pre style="margin: 0">-<span id="LC466" class="line"> <span class="n" style="color: #333">envstr</span> <span class="o" style="font-weight: bold">=</span> <span class="n" style="color: #333">getenv</span><span class="p">(</span><span class="s" style="color: #d14">"<span class="idiff left right">ENABLE_DXT_IO_TRACE_MEM</span>"</span><span class="p">);</span></span>
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<pre style="margin: 0">+<span id="LC466" class="line"> <span class="n" style="color: #333">envstr</span> <span class="o" style="font-weight: bold">=</span> <span class="n" style="color: #333">getenv</span><span class="p">(</span><span class="s" style="color: #d14">"<span class="idiff left right">DXT_ENABLE_IO_TRACE</span>"</span><span class="p">);</span></span>
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467
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<pre style="margin: 0"> <span id="LC467" class="line"> <span class="k" style="font-weight: bold">if</span><span class="p">(</span><span class="n" style="color: #333">envstr</span> <span class="o" style="font-weight: bold">&&</span> <span class="n" style="color: #333">dxt_posix_runtime</span> <span class="o" style="font-weight: bold">==</span> <span class="nb" style="color: #0086b3">NULL</span><span class="p">)</span></span>
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<pre style="margin: 0"> <span id="LC468" class="line"> <span class="p">{</span></span>
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<pre style="margin: 0"> <span id="LC469" class="line"> <span class="n" style="color: #333">ret</span> <span class="o" style="font-weight: bold">=</span> <span class="n" style="color: #333">sscanf</span><span class="p">(</span><span class="n" style="color: #333">envstr</span><span class="p">,</span> <span class="s" style="color: #d14">"%lf"</span><span class="p">,</span> <span class="o" style="font-weight: bold">&</span><span class="n" style="color: #333">tmpfloat</span><span class="p">);</span></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#877f1651aa0eb0d9a867254560698309a8f666df"><strong>darshan-runtime/lib/darshan-mpiio.c</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="862" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="862" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -862,7 +862,7 @@ static void mpiio_runtime_initialize()</td>
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<pre style="margin: 0"> <span id="LC862" class="line"> <span class="n" style="color: #333">memset</span><span class="p">(</span><span class="n" style="color: #333">mpiio_runtime</span><span class="p">,</span> <span class="mi" style="color: #099">0</span><span class="p">,</span> <span class="k" style="font-weight: bold">sizeof</span><span class="p">(</span><span class="o" style="font-weight: bold">*</span><span class="n" style="color: #333">mpiio_runtime</span><span class="p">));</span></span>
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<pre style="margin: 0"> <span id="LC864" class="line"> <span class="cm" style="color: #998; font-style: italic">/* check if DXT (Darshan extended tracing) should be enabled */</span></span>
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<pre style="margin: 0">-<span id="LC865" class="line"> <span class="k" style="font-weight: bold">if</span> <span class="p">(</span><span class="n" style="color: #333">getenv</span><span class="p">(</span><span class="s" style="color: #d14">"<span class="idiff left right">ENABLE_DXT_IO_TRACE_MEM</span>"</span><span class="p">))</span> <span class="p">{</span></span>
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<pre style="margin: 0">+<span id="LC865" class="line"> <span class="k" style="font-weight: bold">if</span> <span class="p">(</span><span class="n" style="color: #333">getenv</span><span class="p">(</span><span class="s" style="color: #d14">"<span class="idiff left right">DXT_ENABLE_IO_TRACE</span>"</span><span class="p">))</span> <span class="p">{</span></span>
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<pre style="margin: 0"> <span id="LC866" class="line"> <span class="n" style="color: #333">enable_dxt_io_trace</span> <span class="o" style="font-weight: bold">=</span> <span class="mi" style="color: #099">1</span><span class="p">;</span></span>
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<pre style="margin: 0"> <span id="LC867" class="line"> <span class="p">}</span></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#62d3c9bc6d4515bfe5c262ecb56de42ca32bc03c"><strong>darshan-runtime/lib/darshan-posix.c</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1291" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -1291,7 +1291,7 @@ static void posix_runtime_initialize()</td>
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<pre style="margin: 0"> <span id="LC1291" class="line"> <span class="n" style="color: #333">memset</span><span class="p">(</span><span class="n" style="color: #333">posix_runtime</span><span class="p">,</span> <span class="mi" style="color: #099">0</span><span class="p">,</span> <span class="k" style="font-weight: bold">sizeof</span><span class="p">(</span><span class="o" style="font-weight: bold">*</span><span class="n" style="color: #333">posix_runtime</span><span class="p">));</span></span>
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<pre style="margin: 0"> <span id="LC1293" class="line"> <span class="cm" style="color: #998; font-style: italic">/* check if DXT (Darshan extended tracing) should be enabled */</span></span>
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1294
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<pre style="margin: 0">-<span id="LC1294" class="line"> <span class="k" style="font-weight: bold">if</span> <span class="p">(</span><span class="n" style="color: #333">getenv</span><span class="p">(</span><span class="s" style="color: #d14">"<span class="idiff left right">ENABLE_DXT_IO_TRACE_MEM</span>"</span><span class="p">))</span> <span class="p">{</span></span>
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<pre style="margin: 0">+<span id="LC1294" class="line"> <span class="k" style="font-weight: bold">if</span> <span class="p">(</span><span class="n" style="color: #333">getenv</span><span class="p">(</span><span class="s" style="color: #d14">"<span class="idiff left right">DXT_ENABLE_IO_TRACE</span>"</span><span class="p">))</span> <span class="p">{</span></span>
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<pre style="margin: 0"> <span id="LC1295" class="line"> <span class="n" style="color: #333">enable_dxt_io_trace</span> <span class="o" style="font-weight: bold">=</span> <span class="mi" style="color: #099">1</span><span class="p">;</span></span>
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<pre style="margin: 0"> <span id="LC1296" class="line"> <span class="p">}</span></span>
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<pre style="margin: 0"> <span id="LC1297" class="line"></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#23911c491be8fa8cb7a78ffa8fcd89f582b778c8"><strong>darshan-util/configure</strong></a>
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<pre style="margin: 0"> <span id="LC1" class="line"><span class="c" style="color: #998; font-style: italic">#! /bin/sh</span></span>
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<pre style="margin: 0"> <span id="LC2" class="line"><span class="c" style="color: #998; font-style: italic"># Guess values for system-dependent variables and create Makefiles.</span></span>
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<pre style="margin: 0">-<span id="LC3" class="line"><span class="c" style="color: #998; font-style: italic"># Generated by GNU Autoconf 2.69 for darshan-util 3.1.<span class="idiff left right">2</span>.</span></span>
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<pre style="margin: 0">+<span id="LC3" class="line"><span class="c" style="color: #998; font-style: italic"># Generated by GNU Autoconf 2.69 for darshan-util 3.1.<span class="idiff left right">3-pre1</span>.</span></span>
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<pre style="margin: 0"> <span id="LC4" class="line"><span class="c" style="color: #998; font-style: italic">#</span></span>
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5
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5
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<pre style="margin: 0"> <span id="LC5" class="line"><span class="c" style="color: #998; font-style: italic">#</span></span>
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<pre style="margin: 0"> <span id="LC6" class="line"><span class="c" style="color: #998; font-style: italic"># Copyright (C) 1992-1996, 1998-2012 Free Software Foundation, Inc.</span></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -577,8 +577,8 @@ MAKEFLAGS=</td>
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577
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577
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<pre style="margin: 0"> <span id="LC577" class="line"><span class="c" style="color: #998; font-style: italic"># Identity of this package.</span></span>
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578
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<pre style="margin: 0"> <span id="LC578" class="line"><span class="nv" style="color: teal">PACKAGE_NAME</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'darshan-util'</span></span>
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579
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579
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<pre style="margin: 0"> <span id="LC579" class="line"><span class="nv" style="color: teal">PACKAGE_TARNAME</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'darshan-util'</span></span>
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580
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<pre style="margin: 0">-<span id="LC580" class="line"><span class="nv" style="color: teal">PACKAGE_VERSION</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'3.1.<span class="idiff left right">2</span>'</span></span>
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581
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<pre style="margin: 0">-<span id="LC581" class="line"><span class="nv" style="color: teal">PACKAGE_STRING</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'darshan-util 3.1.<span class="idiff left right">2</span>'</span></span>
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580
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<pre style="margin: 0">+<span id="LC580" class="line"><span class="nv" style="color: teal">PACKAGE_VERSION</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'3.1.<span class="idiff left right">3-pre1</span>'</span></span>
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581
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<pre style="margin: 0">+<span id="LC581" class="line"><span class="nv" style="color: teal">PACKAGE_STRING</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">'darshan-util 3.1.<span class="idiff left right">3-pre1</span>'</span></span>
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<pre style="margin: 0"> <span id="LC582" class="line"><span class="nv" style="color: teal">PACKAGE_BUGREPORT</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">''</span></span>
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583
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583
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<pre style="margin: 0"> <span id="LC583" class="line"><span class="nv" style="color: teal">PACKAGE_URL</span><span class="o" style="font-weight: bold">=</span><span class="s1" style="color: #d14">''</span></span>
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584
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<pre style="margin: 0"> <span id="LC584" class="line"></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -1247,7 +1247,7 @@ if test "$ac_init_help" = "long"; then</td>
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<pre style="margin: 0"> <span id="LC1247" class="line"> <span class="c" style="color: #998; font-style: italic"># Omit some internal or obsolete options to make the list less imposing.</span></span>
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<pre style="margin: 0"> <span id="LC1248" class="line"> <span class="c" style="color: #998; font-style: italic"># This message is too long to be a string in the A/UX 3.1 sh.</span></span>
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1249
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1249
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<pre style="margin: 0"> <span id="LC1249" class="line"> cat <span class="sh" style="color: #d14"><<_ACEOF</span></span>
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<pre style="margin: 0">-<span id="LC1250" class="line"><span class="sh" style="color: #d14">\`configure' configures darshan-util 3.1.<span class="idiff left right">2</span> to adapt to many kinds of systems.</span></span>
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<pre style="margin: 0">+<span id="LC1250" class="line"><span class="sh" style="color: #d14">\`configure' configures darshan-util 3.1.<span class="idiff left right">3-pre1</span> to adapt to many kinds of systems.</span></span>
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<pre style="margin: 0"> <span id="LC1251" class="line"></span>
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<pre style="margin: 0"> <span id="LC1252" class="line"><span class="sh" style="color: #d14">Usage: $0 [OPTION]... [VAR=VALUE]...</span></span>
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<pre style="margin: 0"> <span id="LC1253" class="line"></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1309" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -1309,7 +1309,7 @@ fi</td>
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1309
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<pre style="margin: 0"> <span id="LC1309" class="line"></span>
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1310
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<pre style="margin: 0"> <span id="LC1310" class="line"><span class="k" style="font-weight: bold">if </span><span class="nb" style="color: #0086b3">test</span> -n <span class="s2" style="color: #d14">"</span><span class="nv" style="color: teal">$ac_init_help</span><span class="s2" style="color: #d14">"</span>; <span class="k" style="font-weight: bold">then</span></span>
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1311
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1311
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<pre style="margin: 0"> <span id="LC1311" class="line"><span class="k" style="font-weight: bold"> case</span> <span class="nv" style="color: teal">$ac_init_help</span> <span class="k" style="font-weight: bold">in</span></span>
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1312
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<pre style="margin: 0">-<span id="LC1312" class="line"><span class="k" style="font-weight: bold"> </span>short <span class="p">|</span> recursive <span class="p">)</span> <span class="nb" style="color: #0086b3">echo</span> <span class="s2" style="color: #d14">"Configuration of darshan-util 3.1.<span class="idiff left right">2</span>:"</span><span class="p">;;</span></span>
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1312
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<pre style="margin: 0">+<span id="LC1312" class="line"><span class="k" style="font-weight: bold"> </span>short <span class="p">|</span> recursive <span class="p">)</span> <span class="nb" style="color: #0086b3">echo</span> <span class="s2" style="color: #d14">"Configuration of darshan-util 3.1.<span class="idiff left right">3-pre1</span>:"</span><span class="p">;;</span></span>
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1313
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1313
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<pre style="margin: 0"> <span id="LC1313" class="line"> <span class="k" style="font-weight: bold">esac</span></span>
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1314
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1314
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<pre style="margin: 0"> <span id="LC1314" class="line"> cat <span class="sh" style="color: #d14"><<\_ACEOF</span></span>
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1315
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1315
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<pre style="margin: 0"> <span id="LC1315" class="line"></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1405" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -1405,7 +1405,7 @@ fi</td>
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1405
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<pre style="margin: 0"> <span id="LC1405" class="line"><span class="nb" style="color: #0086b3">test</span> -n <span class="s2" style="color: #d14">"</span><span class="nv" style="color: teal">$ac_init_help</span><span class="s2" style="color: #d14">"</span> <span class="o" style="font-weight: bold">&&</span> <span class="nb" style="color: #0086b3">exit</span> <span class="nv" style="color: teal">$ac_status</span></span>
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1406
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1406
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<pre style="margin: 0"> <span id="LC1406" class="line"><span class="k" style="font-weight: bold">if</span> <span class="nv" style="color: teal">$ac_init_version</span>; <span class="k" style="font-weight: bold">then</span></span>
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1407
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<pre style="margin: 0"> <span id="LC1407" class="line"><span class="k" style="font-weight: bold"> </span>cat <span class="sh" style="color: #d14"><<\_ACEOF</span></span>
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<pre style="margin: 0">-<span id="LC1408" class="line"><span class="sh" style="color: #d14">darshan-util configure 3.1.<span class="idiff left right">2</span></span></span>
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<pre style="margin: 0">+<span id="LC1408" class="line"><span class="sh" style="color: #d14">darshan-util configure 3.1.<span class="idiff left right">3-pre1</span></span></span>
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<pre style="margin: 0"> <span id="LC1409" class="line"><span class="sh" style="color: #d14">generated by GNU Autoconf 2.69</span></span>
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<pre style="margin: 0"> <span id="LC1411" class="line"><span class="sh" style="color: #d14">Copyright (C) 2012 Free Software Foundation, Inc.</span></span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="1770" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -1770,7 +1770,7 @@ cat >config.log <<_ACEOF</td>
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<pre style="margin: 0"> <span id="LC1770" class="line"><span class="sh" style="color: #d14">This file contains any messages produced by compilers while</span></span>
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1771
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<pre style="margin: 0"> <span id="LC1771" class="line"><span class="sh" style="color: #d14">running configure, to aid debugging if configure makes a mistake.</span></span>
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1772
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1772
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<pre style="margin: 0"> <span id="LC1772" class="line"></span>
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1773
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<pre style="margin: 0">-<span id="LC1773" class="line"><span class="sh" style="color: #d14">It was created by darshan-util $as_me 3.1.<span class="idiff left right">2</span>, which was</span></span>
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1773
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<pre style="margin: 0">+<span id="LC1773" class="line"><span class="sh" style="color: #d14">It was created by darshan-util $as_me 3.1.<span class="idiff left right">3-pre1</span>, which was</span></span>
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1774
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1774
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<pre style="margin: 0"> <span id="LC1774" class="line"><span class="sh" style="color: #d14">generated by GNU Autoconf 2.69. Invocation command line was</span></span>
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1775
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1775
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<pre style="margin: 0"> <span id="LC1775" class="line"></span>
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1776
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1776
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<pre style="margin: 0"> <span id="LC1776" class="line"><span class="sh" style="color: #d14"> $ $0 $@</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="4117" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="4117" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -4117,7 +4117,7 @@ fi</td>
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4117
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4117
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<pre style="margin: 0"> <span id="LC4117" class="line"><span class="k" style="font-weight: bold">done</span></span>
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4118
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4118
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<pre style="margin: 0"> <span id="LC4118" class="line"></span>
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4119
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4119
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<pre style="margin: 0"> <span id="LC4119" class="line"></span>
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4120
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<pre style="margin: 0">-<span id="LC4120" class="line"><span class="nv" style="color: teal">DARSHAN_UTIL_VERSION</span><span class="o" style="font-weight: bold">=</span><span class="s2" style="color: #d14">"3.1.<span class="idiff left right">2</span>"</span></span>
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4120
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<pre style="margin: 0">+<span id="LC4120" class="line"><span class="nv" style="color: teal">DARSHAN_UTIL_VERSION</span><span class="o" style="font-weight: bold">=</span><span class="s2" style="color: #d14">"3.1.<span class="idiff left right">3-pre1</span>"</span></span>
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4121
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4123
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4123
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -4633,7 +4633,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1</td>
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4633
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<pre style="margin: 0"> <span id="LC4633" class="line"><span class="sh" style="color: #d14"># report actual input values of CONFIG_FILES etc. instead of their</span></span>
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4634
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<pre style="margin: 0"> <span id="LC4634" class="line"><span class="sh" style="color: #d14"># values after options handling.</span></span>
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4635
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4635
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<pre style="margin: 0"> <span id="LC4635" class="line"><span class="sh" style="color: #d14">ac_log="</span></span>
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<pre style="margin: 0">-<span id="LC4636" class="line"><span class="sh" style="color: #d14">This file was extended by darshan-util $as_me 3.1.<span class="idiff left right">2</span>, which was</span></span>
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<pre style="margin: 0">+<span id="LC4636" class="line"><span class="sh" style="color: #d14">This file was extended by darshan-util $as_me 3.1.<span class="idiff left right">3-pre1</span>, which was</span></span>
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4637
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<pre style="margin: 0"> <span id="LC4637" class="line"><span class="sh" style="color: #d14">generated by GNU Autoconf 2.69. Invocation command line was</span></span>
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<pre style="margin: 0"> <span id="LC4638" class="line"></span>
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<pre style="margin: 0"> <span id="LC4639" class="line"><span class="sh" style="color: #d14"> CONFIG_FILES = $CONFIG_FILES</span></span>
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<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -4695,7 +4695,7 @@ _ACEOF</td>
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<pre style="margin: 0"> <span id="LC4695" class="line">cat >><span class="nv" style="color: teal">$CONFIG_STATUS</span> <span class="sh" style="color: #d14"><<_ACEOF || ac_write_fail=1</span></span>
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<pre style="margin: 0"> <span id="LC4696" class="line"><span class="sh" style="color: #d14">ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"</span></span>
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<pre style="margin: 0"> <span id="LC4697" class="line"><span class="sh" style="color: #d14">ac_cs_version="\\</span></span>
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<pre style="margin: 0">-<span id="LC4698" class="line"><span class="sh" style="color: #d14">darshan-util config.status 3.1.<span class="idiff left right">2</span></span></span>
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<pre style="margin: 0">+<span id="LC4698" class="line"><span class="sh" style="color: #d14">darshan-util config.status 3.1.<span class="idiff left right">3-pre1</span></span></span>
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<pre style="margin: 0"> <span id="LC4699" class="line"><span class="sh" style="color: #d14">configured by $0, generated by GNU Autoconf 2.69,</span></span>
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<pre style="margin: 0"> <span id="LC4700" class="line"><span class="sh" style="color: #d14"> with options \\"\$ac_cs_config\\"</span></span>
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<pre style="margin: 0"> <span id="LC4701" class="line"></span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#a9f557d482eaf058064eaed649f266799512281e"><strong>darshan-util/configure.in</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="5" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -5,7 +5,7 @@ dnl Process this file with autoconf to produce a configure script.</td>
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<pre style="margin: 0"> <span id="LC5" class="line">dnl You may need to use autoheader as well if changing any DEFINEs</span>
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<pre style="margin: 0"> <span id="LC6" class="line"></span>
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<pre style="margin: 0"> <span id="LC7" class="line">dnl sanity checks, output header, location of scripts used here</span>
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<pre style="margin: 0">-<span id="LC8" class="line">AC_INIT([darshan-util], [3.1.<span class="idiff left right">2</span>])</span>
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<pre style="margin: 0">+<span id="LC8" class="line">AC_INIT([darshan-util], [3.1.<span class="idiff left right">3-pre1</span>])</span>
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<pre style="margin: 0"> <span id="LC9" class="line">AC_CONFIG_SRCDIR([darshan-logutils.h])</span>
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<pre style="margin: 0"> <span id="LC10" class="line">AC_CONFIG_AUX_DIR(../maint/config)</span>
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<pre style="margin: 0"> <span id="LC11" class="line">AC_CONFIG_HEADER(darshan-util-config.h)</span>
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<a href="https://xgitlab.cels.anl.gov/darshan/darshan/compare/8857f5ff2755b3cc1ec15a0bd2c55b30a492ed60...f8cfb07e7874fe885d05122eb1127e38ca41b08a#00fda3684246660c53077955f537d75b3aa90000"><strong>darshan-util/doc/darshan-util.txt</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="587" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="587" style="background: #fafafa; border-right-color: #f0f0f0; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="background: #fafafa; color: rgba(0,0,0,0.3); padding-left: 0.5em; padding-right: 0.5em" bgcolor="#fafafa">@@ -587,6 +587,106 @@ The `--file-list-detailed` is the same as --file-list except that it</td>
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<pre style="margin: 0"> <span id="LC587" class="line">produces many columns of output containing statistics broken down by file.</span>
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<pre style="margin: 0"> <span id="LC588" class="line">This option is mainly useful for more detailed automated analysis.</span>
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<pre style="margin: 0"> <span id="LC589" class="line"></span>
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<pre style="margin: 0">+<span id="LC590" class="line">=== darshan-dxt-parser</span>
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<pre style="margin: 0">+<span id="LC591" class="line"></span>
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<pre style="margin: 0">+<span id="LC592" class="line">The `darshan-dxt-parser` utility can be used to parse DxT traces out of Darshan</span>
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<pre style="margin: 0">+<span id="LC593" class="line">log files, assuming the corresponding application was executed with the DxT</span>
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<pre style="margin: 0">+<span id="LC594" class="line">modules enabled. The following example parses all DxT trace information out</span>
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<pre style="margin: 0">+<span id="LC595" class="line">of a Darshan log file and stores it in a text file:</span>
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<pre style="margin: 0">+<span id="LC596" class="line"></span>
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<pre style="margin: 0">+<span id="LC597" class="line">----</span>
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<pre style="margin: 0">+<span id="LC598" class="line">darshan-dxt-parser shane_ior_id25016_1-31-38066-13864742673678115131_1.darshan > ~/ior-trace.txt</span>
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<pre style="margin: 0">+<span id="LC599" class="line">----</span>
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<pre style="margin: 0">+<span id="LC600" class="line"></span>
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<pre style="margin: 0">+<span id="LC601" class="line">=== Guide to darshan-dxt-parser output</span>
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602
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<pre style="margin: 0">+<span id="LC602" class="line"></span>
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<pre style="margin: 0">+<span id="LC603" class="line">The preamble to `darshan-dxt-parser` output is identical to that of the traditional</span>
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<pre style="margin: 0">+<span id="LC604" class="line">`darshan-parser` utility, which is described above.</span>
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605
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<pre style="margin: 0">+<span id="LC605" class="line"></span>
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<pre style="margin: 0">+<span id="LC606" class="line">`darshan-dxt-parser` displays detailed trace information contained within a Darshan log</span>
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<pre style="margin: 0">+<span id="LC607" class="line">that was generated with DxT instrumentation enabled. Trace data is captured from both</span>
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608
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<pre style="margin: 0">+<span id="LC608" class="line">POSIX and MPI-IO interfaces. Example output is given below:</span>
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609
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<pre style="margin: 0">+<span id="LC609" class="line"></span>
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<pre style="margin: 0">+<span id="LC610" class="line">.Example output</span>
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611
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<pre style="margin: 0">+<span id="LC611" class="line">----</span>
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612
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<pre style="margin: 0">+<span id="LC612" class="line"># ***************************************************</span>
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613
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<pre style="margin: 0">+<span id="LC613" class="line"># DXT_POSIX module data</span>
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614
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<pre style="margin: 0">+<span id="LC614" class="line"># ***************************************************</span>
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615
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<pre style="margin: 0">+<span id="LC615" class="line"></span>
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616
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<pre style="margin: 0">+<span id="LC616" class="line"># DXT, file_id: 16457598720760448348, file_name: /tmp/test/testFile</span>
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<td class="diff-line-num new new_line" data-linenumber="617" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
617
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<pre style="margin: 0">+<span id="LC617" class="line"># DXT, rank: 0, hostname: shane-thinkpad</span>
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<td class="diff-line-num new new_line" data-linenumber="618" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
618
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<pre style="margin: 0">+<span id="LC618" class="line"># DXT, write_count: 4, read_count: 4</span>
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<td class="diff-line-num new new_line" data-linenumber="619" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
619
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<pre style="margin: 0">+<span id="LC619" class="line"># DXT, mnt_pt: /, fs_type: ext4</span>
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620
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<pre style="margin: 0">+<span id="LC620" class="line"># Module Rank Wt/Rd Segment Offset Length Start(s) End(s)</span>
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<td class="diff-line-num new new_line" data-linenumber="621" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
621
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<pre style="margin: 0">+<span id="LC621" class="line"> X_POSIX 0 write 0 0 262144 0.0029 0.0032</span>
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<td class="diff-line-num new new_line" data-linenumber="622" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
622
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<pre style="margin: 0">+<span id="LC622" class="line"> X_POSIX 0 write 1 262144 262144 0.0032 0.0035</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="623" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
623
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<pre style="margin: 0">+<span id="LC623" class="line"> X_POSIX 0 write 2 524288 262144 0.0035 0.0038</span>
</pre>
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624
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<pre style="margin: 0">+<span id="LC624" class="line"> X_POSIX 0 write 3 786432 262144 0.0038 0.0040</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="625" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
625
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<pre style="margin: 0">+<span id="LC625" class="line"> X_POSIX 0 read 0 0 262144 0.0048 0.0048</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="626" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
626
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<pre style="margin: 0">+<span id="LC626" class="line"> X_POSIX 0 read 1 262144 262144 0.0049 0.0049</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="627" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
627
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<pre style="margin: 0">+<span id="LC627" class="line"> X_POSIX 0 read 2 524288 262144 0.0049 0.0050</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="628" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
628
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<pre style="margin: 0">+<span id="LC628" class="line"> X_POSIX 0 read 3 786432 262144 0.0050 0.0051</span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="629" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
629
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<pre style="margin: 0">+<span id="LC629" class="line"></span>
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630
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<pre style="margin: 0">+<span id="LC630" class="line"># ***************************************************</span>
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<td class="diff-line-num new new_line" data-linenumber="631" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
631
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<pre style="margin: 0">+<span id="LC631" class="line"># DXT_MPIIO module data</span>
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<td class="diff-line-num new new_line" data-linenumber="632" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
632
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<pre style="margin: 0">+<span id="LC632" class="line"># ***************************************************</span>
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633
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<pre style="margin: 0">+<span id="LC633" class="line"></span>
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<td class="diff-line-num new new_line" data-linenumber="634" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
634
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<pre style="margin: 0">+<span id="LC634" class="line"># DXT, file_id: 16457598720760448348, file_name: /tmp/test/testFile</span>
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<pre style="margin: 0">+<span id="LC635" class="line"># DXT, rank: 0, hostname: shane-thinkpad</span>
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636
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<pre style="margin: 0">+<span id="LC636" class="line"># DXT, write_count: 4, read_count: 4</span>
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637
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<pre style="margin: 0">+<span id="LC637" class="line"># DXT, mnt_pt: /, fs_type: ext4</span>
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638
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<pre style="margin: 0">+<span id="LC638" class="line"># Module Rank Wt/Rd Segment Length Start(s) End(s)</span>
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639
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<pre style="margin: 0">+<span id="LC639" class="line"> X_MPIIO 0 write 0 262144 0.0029 0.0032</span>
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640
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<pre style="margin: 0">+<span id="LC640" class="line"> X_MPIIO 0 write 1 262144 0.0032 0.0035</span>
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641
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<pre style="margin: 0">+<span id="LC641" class="line"> X_MPIIO 0 write 2 262144 0.0035 0.0038</span>
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642
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<pre style="margin: 0">+<span id="LC642" class="line"> X_MPIIO 0 write 3 262144 0.0038 0.0040</span>
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643
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<pre style="margin: 0">+<span id="LC643" class="line"> X_MPIIO 0 read 0 262144 0.0048 0.0049</span>
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644
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<pre style="margin: 0">+<span id="LC644" class="line"> X_MPIIO 0 read 1 262144 0.0049 0.0049</span>
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<pre style="margin: 0">+<span id="LC645" class="line"> X_MPIIO 0 read 2 262144 0.0049 0.0050</span>
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<pre style="margin: 0">+<span id="LC646" class="line"> X_MPIIO 0 read 3 262144 0.0050 0.0051</span>
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<pre style="margin: 0">+<span id="LC647" class="line">----</span>
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648
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<pre style="margin: 0">+<span id="LC648" class="line"></span>
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649
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<pre style="margin: 0">+<span id="LC649" class="line">===== DxT POSIX module</span>
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650
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<pre style="margin: 0">+<span id="LC650" class="line"></span>
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651
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<pre style="margin: 0">+<span id="LC651" class="line">This module provides details on each read or write access at the POSIX layer.</span>
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652
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<pre style="margin: 0">+<span id="LC652" class="line">The trace output is organized first by file then by process rank. So, for each</span>
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653
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<pre style="margin: 0">+<span id="LC653" class="line">file accessed by the application, DxT will provide each process's I/O trace</span>
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654
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<pre style="margin: 0">+<span id="LC654" class="line">segments in separate blocks, ordered by increasing process rank. Within each</span>
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655
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<pre style="margin: 0">+<span id="LC655" class="line">file/rank block, I/O trace segments are ordered chronologically.</span>
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<pre style="margin: 0">+<span id="LC656" class="line"></span>
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<pre style="margin: 0">+<span id="LC657" class="line">Before providing details on each I/O operation, DxT provides a short preamble</span>
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<pre style="margin: 0">+<span id="LC658" class="line">for each file/rank trace block with the following bits of information: the Darshan</span>
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<pre style="margin: 0">+<span id="LC659" class="line">identifier for the file (which is equivalent to the identifers used by Darshan in its</span>
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<pre style="margin: 0">+<span id="LC660" class="line">traditional modules), the full file path, the corresponding MPI rank the current</span>
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<pre style="margin: 0">+<span id="LC661" class="line">block of trace data belongs to, the hostname associated with this process rank, the</span>
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<pre style="margin: 0">+<span id="LC662" class="line">number of individual POSIX read and write operations by this process, and the mount</span>
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<pre style="margin: 0">+<span id="LC663" class="line">point and file system type corresponding to the traced file.</span>
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664
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<pre style="margin: 0">+<span id="LC664" class="line"></span>
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<pre style="margin: 0">+<span id="LC665" class="line">The output format for each indvidual I/O operation segment is:</span>
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<pre style="margin: 0">+<span id="LC666" class="line"></span>
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<pre style="margin: 0">+<span id="LC667" class="line">----</span>
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<pre style="margin: 0">+<span id="LC668" class="line"># Module Rank Wt/Rd Segment Offset Length Start(s) End(s)</span>
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<pre style="margin: 0">+<span id="LC669" class="line">----</span>
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<pre style="margin: 0">+<span id="LC670" class="line"></span>
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<pre style="margin: 0">+<span id="LC671" class="line">* Module: corresponding DxT module (DXT_POSIX or DXT_MPIIO)</span>
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<pre style="margin: 0">+<span id="LC672" class="line">* Rank: process rank responsible for I/O operation</span>
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<pre style="margin: 0">+<span id="LC673" class="line">* Wt/Rd: whether the operation was a write or read</span>
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<pre style="margin: 0">+<span id="LC674" class="line">* Segment: The operation number for this segment (first operation is segment 0)</span>
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<pre style="margin: 0">+<span id="LC675" class="line">* Offset: file offset the I/O operation occured at</span>
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<pre style="margin: 0">+<span id="LC676" class="line">* Length: length of the I/O operation in bytes</span>
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<pre style="margin: 0">+<span id="LC677" class="line">* Start: timestamp of the start of the operation (w.r.t. application start time)</span>
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<pre style="margin: 0">+<span id="LC678" class="line">* End: timestamp of the end of the operation (w.r.t. application start time)</span>
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<pre style="margin: 0">+<span id="LC679" class="line"></span>
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<pre style="margin: 0">+<span id="LC680" class="line">===== DxT MPI-IO module</span>
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681
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<pre style="margin: 0">+<span id="LC681" class="line"></span>
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<td class="diff-line-num new new_line" data-linenumber="682" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
682
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<pre style="margin: 0">+<span id="LC682" class="line">If the MPI-IO interface is used by an application, this module provides details on</span>
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<td class="diff-line-num new new_line" data-linenumber="683" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
683
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<pre style="margin: 0">+<span id="LC683" class="line">each read or write access at the MPI-IO layer. This data is often useful in</span>
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<td class="diff-line-num new new_line" data-linenumber="684" style="background: #ddfbe6; border-right-color: #c7f0d2; border-right-style: solid; border-right-width: 1px; color: rgba(0,0,0,0.3); padding: 0 5px; text-align: right; width: 35px" align="right" bgcolor="#ddfbe6">
684
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<pre style="margin: 0">+<span id="LC684" class="line">understanding how MPI-IO read or write operations map to underlying POSIX read</span>
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685
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<pre style="margin: 0">+<span id="LC685" class="line">or write operations issued to the traced file.</span>
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686
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<pre style="margin: 0">+<span id="LC686" class="line"></span>
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687
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<pre style="margin: 0">+<span id="LC687" class="line">The output format for the DxT MPI-IO module is essentially identical to the DxT</span>
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<pre style="margin: 0">+<span id="LC688" class="line">POSIX module, except that the offset of file operations is not tracked.</span>
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689
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<pre style="margin: 0">+<span id="LC689" class="line"></span>
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590
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<pre style="margin: 0"> <span id="LC690" class="line">=== Other darshan-util utilities</span>
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591
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691
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<pre style="margin: 0"> <span id="LC691" class="line"></span>
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592
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<pre style="margin: 0"> <span id="LC692" class="line">The darshan-util package includes a number of other utilies that can be</span>
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