Thanks, Iulian, for explaining it. I am still working on cgm with cubit13.1 build, pretty stuck here, but will let you know if anything can be improved.<br><br>Jane<br><br><div class="gmail_quote">On Wed, Oct 17, 2012 at 9:52 AM, Iulian Grindeanu <span dir="ltr"><<a href="mailto:iulian@mcs.anl.gov" target="_blank">iulian@mcs.anl.gov</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div><div style="font-size:12pt;font-family:times new roman,new york,times,serif">Hi Jane,<br>Buildbot is doing a make distclean every time. The problem with this and with one moab test and some meshkit tests was the local <br>
LD_LIBRARY_PATH.<br><br>This should not be a problem, but cgma has some path issues. <br><br>LD path was pointing to cubit 13.1, and it got mixed up. The buildbot main builds are now with cubit 12.2, cubit merge12.2 branch of cgm<br>
The trunk is tested only against occ 653, shared and static, serial.<br><br>Tonight these should not be a problem, I removed the cubit path references from the .bashrc of fathom account.<br><br>If we are going to support both (cubit 12 and cubit 13) for a while, it would be a good idea to remove it from .bashrc (PATH and LD_LIBRARY_PATH). Set it only when needed to the required version of cubit.<br>
<br>Iulian<br><br><br><hr><div><div class="h5"><blockquote style="border-left:2px solid rgb(16,16,255);margin-left:5px;padding-left:5px">Do a 'make distclean' may clear the problems.<br><br>Jane<br><br><div class="gmail_quote">
On Wed, Oct 17, 2012 at 12:30 AM,  <span dir="ltr"><<a href="mailto:cgma-dev@mcs.anl.gov" target="_blank">cgma-dev@mcs.anl.gov</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><h1><a href="http://gnep.mcs.anl.gov:8010/" target="_blank">Fathom</a>: <a href="http://gnep.mcs.anl.gov:8010/builders/cgm-occ-par" target="_blank">cgm-occ-par</a> build <a href="http://gnep.mcs.anl.gov:8010/builders/cgm-occ-par/builds/38" target="_blank">#38</a></h1>


<table>
<tbody><tr><td><b>Results:</b></td><td>failed test</td></tr>
<tr><td><b>Buildslave:</b></td><td>gnep</td></tr>
<tr><td><b>Revision:</b></td><td>None</td></tr>
<tr><td><b>Reason:</b></td><td>The Nightly scheduler named 'cgm-occ-par-nightly' triggered this build</td></tr>
</tbody></table>
<h2>Log Excerpt</h2>
<pre>Making check in OCC
make[3]: Entering directory `/disks/itaps-buildslave/cgm-occ-par/build/geom/OCC'
make[3]: Nothing to be done for `check'.
 ...Making check in init
make[2]: Entering directory `/disks/itaps-buildslave/cgm-occ-par/build/init'
make[2]: Nothing to be done for `check'.
 ...Making check in .
make[2]: Entering directory `/disks/itaps-buildslave/cgm-occ-par/build'
make[2]: Nothing to be done for `check-am'.
 ...Making check in itaps
make[2]: Entering directory `/disks/itaps-buildslave/cgm-occ-par/build/itaps'
make  check-recursive
make[3]: Entering directory `/disks/itaps-buildslave/cgm-occ-par/build/itaps'
Making check in .
make[4]: Entering directory `/disks/itaps-buildslave/cgm-occ-par/build/itaps'
make  chaman test_edge_orient   testgeom_occ copy_attrib partest
make[5]: Entering directory `/disks/itaps-buildslave/cgm-occ-par/build/itaps'
/homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom   -DLITTLE_ENDIAN=BYTE_ORDER   -DTEMPLATE_DEFS_INCLUDED  -DHAVE_OCC -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util -I../geom -I../init -I../geom/parallel -DUSE_MPI  -DFORCE_OCC   -Wall -pipe -pedantic -O2 -DNDEBUG -MT partest-partest.o -MD -MP -MF .deps/partest-partest.Tpo -c -o partest-partest.o `test -f 'partest.cpp' || echo './'`partest.cpp
In file included from ../geom/parallel/CGMmpi.h:11,
                 from partest.cpp:15:
/home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpi.h:373: warning: ISO C++ 1998 does not support ‘long long’
partest.cpp: In function ‘int main(int, char**)’:
partest.cpp:72: warning: ‘rss_before’ may be used uninitialized in this function
partest.cpp:72: warning: ‘size_before’ may be used uninitialized in this function
mv -f .deps/partest-partest.Tpo .deps/partest-partest.Po
/homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom  -DLITTLE_ENDIAN=BYTE_ORDER   -DTEMPLATE_DEFS_INCLUDED  -DHAVE_OCC -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util -I../geom -I../init -I../geom/parallel -DUSE_MPI    -Wall -pipe -pedantic -O2 -DNDEBUG -MT chaman.o -MD -MP -MF .deps/chaman.Tpo -c -o chaman.o chaman.cc
/homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom  -DLITTLE_ENDIAN=BYTE_ORDER   -DTEMPLATE_DEFS_INCLUDED  -DHAVE_OCC -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util -I../geom -I../init -I../geom/parallel -DUSE_MPI    -Wall -pipe -pedantic -O2 -DNDEBUG -MT test_edge_orient.o -MD -MP -MF .deps/test_edge_orient.Tpo -c -o test_edge_orient.o test_edge_orient.cc
/homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom   -DLITTLE_ENDIAN=BYTE_ORDER   -DTEMPLATE_DEFS_INCLUDED  -DHAVE_OCC -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util -I../geom -I../init -I../geom/parallel -DUSE_MPI  -DFORCE_OCC   -Wall -pipe -pedantic -O2 -DNDEBUG -MT testgeom_occ-testgeom.o -MD -MP -MF .deps/testgeom_occ-testgeom.Tpo -c -o testgeom_occ-testgeom.o `test -f 'testgeom.cc' || echo './'`testgeom.cc
/homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom  -DLITTLE_ENDIAN=BYTE_ORDER   -DTEMPLATE_DEFS_INCLUDED  -DHAVE_OCC -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util -I../geom -I../init -I../geom/parallel -DUSE_MPI    -Wall -pipe -pedantic -O2 -DNDEBUG -MT copy_attrib.o -MD -MP -MF .deps/copy_attrib.Tpo -c -o copy_attrib.o copy_attrib.cpp
mv -f .deps/chaman.Tpo .deps/chaman.Po
/bin/sh ../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -O2 -DNDEBUG  -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib  -o partest partest-partest.o libiGeom.la -lTKernel -lm
mv -f .deps/copy_attrib.Tpo .deps/copy_attrib.Po
/bin/sh ../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -O2 -DNDEBUG  -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib  -o chaman chaman.o libiGeom.la -lTKernel -lm
mv -f .deps/test_edge_orient.Tpo .deps/test_edge_orient.Po
/bin/sh ../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -O2 -DNDEBUG  -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib  -o copy_attrib copy_attrib.o libiGeom.la -lTKernel -lm
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -O2 -DNDEBUG -o .libs/partest partest-partest.o  -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib ./.libs/libiGeom.so /homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib/libTKernel.so -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -O2 -DNDEBUG -o .libs/chaman chaman.o  -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib ./.libs/libiGeom.so /homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib/libTKernel.so -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib
libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -O2 -DNDEBUG -o .libs/copy_attrib copy_attrib.o  -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib ./.libs/libiGeom.so /homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib/libTKernel.so -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib
mv -f .deps/testgeom_occ-testgeom.Tpo .deps/testgeom_occ-testgeom.Po
/bin/sh ../libtool  --tag=CXX   --mode=link /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx  -Wall -pipe -pedantic -O2 -DNDEBUG  -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib  -o test_edge_orient test_edge_orient.o libiGeom.la -lTKernel -lm
/homes/fathom/install/occpar/cgm/lib/libcgm.so.0: undefined reference to `Standard_PI'
collect2: ld returned 1 exit status
 ...make[5]: *** Waiting for unfinished jobs....
/homes/fathom/install/occpar/cgm/lib/libcgm.so.0: undefined reference to `Standard_PI'
collect2: ld returned 1 exit status
 .../homes/fathom/install/occpar/cgm/lib/libcgm.so.0: undefined reference to `Standard_PI'
collect2: ld returned 1 exit status
 ...libtool: link: /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall -pipe -pedantic -O2 -DNDEBUG -o .libs/test_edge_orient test_edge_orient.o  -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib ./.libs/libiGeom.so /homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib/libTKernel.so -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib -Wl,-rpath -Wl,/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib
/homes/fathom/install/occpar/cgm/lib/libcgm.so.0: undefined reference to `Standard_PI'
collect2: ld returned 1 exit status
</pre>
</blockquote></div><br><br clear="all"><br>-- <br>Jane Hu<br>
<br>
Asst. Researcher<br>
Dept. of Engineering Physics<br>
UW @ Madison<br>
<br>
"And we know that for those who love God, that is, for those who are 
called according to his purpose, all things are working together for 
good." (Romans 8:28)<br>
</blockquote><br></div></div></div></div></blockquote></div><br><br clear="all"><br>-- <br>Jane Hu<br>
<br>
Asst. Researcher<br>
Dept. of Engineering Physics<br>
UW @ Madison<br>
<br>
"And we know that for those who love God, that is, for those who are 
called according to his purpose, all things are working together for 
good." (Romans 8:28)<br>